Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Prdm1Q60636 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Prdm1Q60636 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Prdm1Q60636 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.76□□□□□ -0.21
Prdm1Q60636 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prdm1Q60636 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Prdm1Q60636 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.76□□□□□ -0.21
Prdm1Q60636 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Prdm1Q60636 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Prdm1Q60636 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prdm1Q60636 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prdm1Q60636 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.76□□□□□ -0.21
Prdm1Q60636 Gm23251-201ENSMUST00000103773 110 ntBASIC13.76□□□□□ -0.21
Prdm1Q60636 Gm13323-201ENSMUST00000120245 1151 ntBASIC13.76□□□□□ -0.21
Prdm1Q60636 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.76□□□□□ -0.21
Prdm1Q60636 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Prdm1Q60636 Gm16570-201ENSMUST00000161951 436 ntBASIC13.76□□□□□ -0.21
Prdm1Q60636 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.76□□□□□ -0.21
Prdm1Q60636 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.76□□□□□ -0.21
Prdm1Q60636 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.76□□□□□ -0.21
Prdm1Q60636 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.76□□□□□ -0.21
Prdm1Q60636 Gm2965-201ENSMUST00000198365 343 ntBASIC13.76□□□□□ -0.21
Prdm1Q60636 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prdm1Q60636 Gm2553-201ENSMUST00000215986 605 ntBASIC13.76□□□□□ -0.21
Prdm1Q60636 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prdm1Q60636 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.76□□□□□ -0.21
Prdm1Q60636 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prdm1Q60636 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prdm1Q60636 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prdm1Q60636 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prdm1Q60636 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.76□□□□□ -0.21
Prdm1Q60636 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.76□□□□□ -0.21
Prdm1Q60636 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prdm1Q60636 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Prdm1Q60636 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prdm1Q60636 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.76□□□□□ -0.21
Prdm1Q60636 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prdm1Q60636 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Prdm1Q60636 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prdm1Q60636 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Prdm1Q60636 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prdm1Q60636 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.75□□□□□ -0.21
Prdm1Q60636 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prdm1Q60636 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prdm1Q60636 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prdm1Q60636 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Prdm1Q60636 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prdm1Q60636 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Prdm1Q60636 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Prdm1Q60636 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prdm1Q60636 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Prdm1Q60636 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prdm1Q60636 Gm12579-201ENSMUST00000118040 783 ntBASIC13.75□□□□□ -0.21
Prdm1Q60636 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prdm1Q60636 Mir5132-201ENSMUST00000175166 71 ntBASIC13.75□□□□□ -0.21
Prdm1Q60636 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.75□□□□□ -0.21
Prdm1Q60636 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.75□□□□□ -0.21
Prdm1Q60636 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.75□□□□□ -0.21
Prdm1Q60636 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.75□□□□□ -0.21
Prdm1Q60636 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.75□□□□□ -0.21
Prdm1Q60636 Gm45113-201ENSMUST00000207518 165 ntBASIC13.75□□□□□ -0.21
Prdm1Q60636 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.75□□□□□ -0.21
Prdm1Q60636 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.75□□□□□ -0.21
Prdm1Q60636 Gm6867-201ENSMUST00000219165 425 ntBASIC13.75□□□□□ -0.21
Prdm1Q60636 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Prdm1Q60636 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prdm1Q60636 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Prdm1Q60636 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Prdm1Q60636 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prdm1Q60636 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prdm1Q60636 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Prdm1Q60636 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prdm1Q60636 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Prdm1Q60636 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.75□□□□□ -0.21
Prdm1Q60636 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prdm1Q60636 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prdm1Q60636 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Prdm1Q60636 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prdm1Q60636 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prdm1Q60636 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Prdm1Q60636 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Prdm1Q60636 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prdm1Q60636 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Prdm1Q60636 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prdm1Q60636 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prdm1Q60636 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prdm1Q60636 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prdm1Q60636 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Prdm1Q60636 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prdm1Q60636 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.74□□□□□ -0.21
Prdm1Q60636 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Prdm1Q60636 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prdm1Q60636 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prdm1Q60636 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Prdm1Q60636 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prdm1Q60636 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Prdm1Q60636 Gm12566-201ENSMUST00000121479 359 ntBASIC13.74□□□□□ -0.21
Prdm1Q60636 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Prdm1Q60636 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.74□□□□□ -0.21
Prdm1Q60636 Mir6979-201ENSMUST00000183927 56 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms