Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Gm17827-201ENSMUST00000211825 742 ntBASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim38Q5SZ99 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Gm11960-201ENSMUST00000122068 925 ntBASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Gm5616-201ENSMUST00000165252 384 ntBASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Gm8741-201ENSMUST00000174736 384 ntBASIC12.24□□□□□ -0.45
Trim38Q5SZ99 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Gm25890-201ENSMUST00000177643 165 ntBASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Gm22614-201ENSMUST00000178300 165 ntBASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Gm17812-201ENSMUST00000204935 318 ntBASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Gm44967-201ENSMUST00000207047 631 ntBASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Gm45224-201ENSMUST00000208203 414 ntBASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Gm22042-201ENSMUST00000082989 165 ntBASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Gm26110-201ENSMUST00000083971 165 ntBASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim38Q5SZ99 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.23□□□□□ -0.45
Trim38Q5SZ99 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 119.3 ms