Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.46□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.46□□□□□ -0.25
Ccdc88aQ5SNZ0 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Ccdc88aQ5SNZ0 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.46□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm38314-201ENSMUST00000195709 625 ntBASIC13.46□□□□□ -0.25
Ccdc88aQ5SNZ0 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC13.46□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm6390-201ENSMUST00000215034 589 ntBASIC13.46□□□□□ -0.25
Ccdc88aQ5SNZ0 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc88aQ5SNZ0 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ccdc88aQ5SNZ0 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc88aQ5SNZ0 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc88aQ5SNZ0 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ccdc88aQ5SNZ0 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc88aQ5SNZ0 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc88aQ5SNZ0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.46□□□□□ -0.25
Ccdc88aQ5SNZ0 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc88aQ5SNZ0 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc88aQ5SNZ0 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc88aQ5SNZ0 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc88aQ5SNZ0 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc88aQ5SNZ0 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc88aQ5SNZ0 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc88aQ5SNZ0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc88aQ5SNZ0 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc88aQ5SNZ0 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc88aQ5SNZ0 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC13.46□□□□□ -0.26
Ccdc88aQ5SNZ0 Gm22146-201ENSMUST00000157397 288 ntBASIC13.46□□□□□ -0.26
Ccdc88aQ5SNZ0 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.46□□□□□ -0.26
Ccdc88aQ5SNZ0 AC165154.1-201ENSMUST00000226661 340 ntBASIC13.46□□□□□ -0.26
Ccdc88aQ5SNZ0 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc88aQ5SNZ0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc88aQ5SNZ0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc88aQ5SNZ0 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.46□□□□□ -0.26
Ccdc88aQ5SNZ0 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc88aQ5SNZ0 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc88aQ5SNZ0 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc88aQ5SNZ0 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.46□□□□□ -0.26
Ccdc88aQ5SNZ0 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.46□□□□□ -0.26
Ccdc88aQ5SNZ0 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc88aQ5SNZ0 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ccdc88aQ5SNZ0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Gm24791-201ENSMUST00000104284 131 ntBASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Gm11979-201ENSMUST00000119629 743 ntBASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Gm37981-201ENSMUST00000194280 535 ntBASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Gm23680-201ENSMUST00000083162 164 ntBASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ccdc88aQ5SNZ0 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ccdc88aQ5SNZ0 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc88aQ5SNZ0 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc88aQ5SNZ0 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc88aQ5SNZ0 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc88aQ5SNZ0 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ccdc88aQ5SNZ0 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC13.44□□□□□ -0.26
Ccdc88aQ5SNZ0 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC13.44□□□□□ -0.26
Ccdc88aQ5SNZ0 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Ccdc88aQ5SNZ0 Gm20414-201ENSMUST00000172918 646 ntBASIC13.44□□□□□ -0.26
Ccdc88aQ5SNZ0 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC13.44□□□□□ -0.26
Ccdc88aQ5SNZ0 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.44□□□□□ -0.26
Ccdc88aQ5SNZ0 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc88aQ5SNZ0 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc88aQ5SNZ0 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc88aQ5SNZ0 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.44□□□□□ -0.26
Ccdc88aQ5SNZ0 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc88aQ5SNZ0 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc88aQ5SNZ0 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc88aQ5SNZ0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc88aQ5SNZ0 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC13.44□□□□□ -0.26
Ccdc88aQ5SNZ0 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
Ccdc88aQ5SNZ0 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms