Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trav5d-4Q5R1F6 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Gm11511-201ENSMUST00000118146 540 ntBASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Gm37259-201ENSMUST00000193903 849 ntBASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav5d-4Q5R1F6 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Gm22323-201ENSMUST00000103832 109 ntBASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Gm7584-201ENSMUST00000175829 940 ntBASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Gm19287-201ENSMUST00000203190 358 ntBASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trav5d-4Q5R1F6 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms