Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Gm7964-201ENSMUST00000051522 1378 ntBASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Gm9035-201ENSMUST00000218318 1697 ntBASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Gm45428-201ENSMUST00000209619 1789 ntBASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Gm14921-201ENSMUST00000118643 908 ntBASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Gm11978-201ENSMUST00000122315 466 ntBASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Gm42602-201ENSMUST00000200288 3224 ntBASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Gm18473-201ENSMUST00000220543 868 ntBASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 AC156560.2-201ENSMUST00000221232 264 ntBASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Gm38049-201ENSMUST00000195698 1372 ntBASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trav3-3Q5R1C3 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -1
Trav3-3Q5R1C3 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Trav3-3Q5R1C3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC8.84□□□□□ -1
Trav3-3Q5R1C3 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trav3-3Q5R1C3 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms