Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Gm4798-201ENSMUST00000218024 1699 ntBASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Rpusd4-201ENSMUST00000034543 1821 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Olfr400-ps1-201ENSMUST00000118094 955 ntBASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Gm4473-201ENSMUST00000145987 657 ntTSL 2 BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Pard3bos3-201ENSMUST00000147177 862 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Gm16165-201ENSMUST00000160140 795 ntBASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Rpl6l-201ENSMUST00000171120 871 ntBASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Gm7160-201ENSMUST00000185535 471 ntTSL 2 BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Gm42875-201ENSMUST00000197674 1015 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Crygc-201ENSMUST00000027089 783 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Syna-201ENSMUST00000149604 2026 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Nrf1-203ENSMUST00000069831 1625 ntTSL 5 BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Pramef12-201ENSMUST00000030326 2460 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Gm16334-201ENSMUST00000159488 694 ntTSL 3 BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Gm17107-201ENSMUST00000170983 553 ntBASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 4930547H16Rik-201ENSMUST00000222281 907 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Snora57-201ENSMUST00000093658 148 ntBASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Olfr1264-201ENSMUST00000099758 927 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Sfta2-201ENSMUST00000171166 508 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Gm42067-202ENSMUST00000210917 410 ntTSL 2 BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Fabp5-201ENSMUST00000029046 987 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Ush2AQ2QI47 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC6□□□□□ -1.45
Ush2AQ2QI47 Gm6286-201ENSMUST00000145247 762 ntBASIC6□□□□□ -1.45
Ush2AQ2QI47 Gm22994-201ENSMUST00000175422 82 ntBASIC6□□□□□ -1.45
Ush2AQ2QI47 Gm27403-201ENSMUST00000184662 214 ntBASIC6□□□□□ -1.45
Ush2AQ2QI47 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC6□□□□□ -1.45
Ush2AQ2QI47 Gm6457-201ENSMUST00000066378 815 ntBASIC6□□□□□ -1.45
Ush2AQ2QI47 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Vmn1r44-203ENSMUST00000226120 1772 ntBASIC6□□□□□ -1.45
Ush2AQ2QI47 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC6□□□□□ -1.45
Ush2AQ2QI47 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC6□□□□□ -1.45
Ush2AQ2QI47 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC6□□□□□ -1.45
Ush2AQ2QI47 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC6□□□□□ -1.45
Ush2AQ2QI47 AC147366.2-201ENSMUST00000226859 2038 ntBASIC6□□□□□ -1.45
Ush2AQ2QI47 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms