Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC11.95□□□□□ -0.5
Col9a1Q05722 Gm43104-201ENSMUST00000197234 311 ntBASIC11.95□□□□□ -0.5
Col9a1Q05722 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 Gm42698-201ENSMUST00000197790 762 ntBASIC11.95□□□□□ -0.5
Col9a1Q05722 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC11.95□□□□□ -0.5
Col9a1Q05722 Gm43852-201ENSMUST00000202098 917 ntBASIC11.95□□□□□ -0.5
Col9a1Q05722 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC11.95□□□□□ -0.5
Col9a1Q05722 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC11.95□□□□□ -0.5
Col9a1Q05722 Gm18042-201ENSMUST00000219887 790 ntBASIC11.95□□□□□ -0.5
Col9a1Q05722 AC156952.1-201ENSMUST00000220361 793 ntBASIC11.95□□□□□ -0.5
Col9a1Q05722 AC123062.1-201ENSMUST00000221287 481 ntBASIC11.95□□□□□ -0.5
Col9a1Q05722 AC154433.1-201ENSMUST00000224401 1183 ntBASIC11.95□□□□□ -0.5
Col9a1Q05722 AC134335.1-201ENSMUST00000227626 329 ntBASIC11.95□□□□□ -0.5
Col9a1Q05722 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Col9a1Q05722 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Col9a1Q05722 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Col9a1Q05722 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Col9a1Q05722 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Col9a1Q05722 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Col9a1Q05722 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Col9a1Q05722 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC11.95□□□□□ -0.5
Col9a1Q05722 Gm5507-201ENSMUST00000091897 1008 ntBASIC11.95□□□□□ -0.5
Col9a1Q05722 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Col9a1Q05722 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC11.95□□□□□ -0.5
Col9a1Q05722 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Col9a1Q05722 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.95□□□□□ -0.5
Col9a1Q05722 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Col9a1Q05722 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
Col9a1Q05722 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col9a1Q05722 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a1Q05722 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a1Q05722 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Col9a1Q05722 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a1Q05722 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a1Q05722 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a1Q05722 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a1Q05722 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a1Q05722 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a1Q05722 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a1Q05722 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a1Q05722 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.94□□□□□ -0.5
Col9a1Q05722 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Col9a1Q05722 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.94□□□□□ -0.5
Col9a1Q05722 Gm23745-201ENSMUST00000104230 125 ntBASIC11.94□□□□□ -0.5
Col9a1Q05722 Gm11393-201ENSMUST00000118019 288 ntBASIC11.94□□□□□ -0.5
Col9a1Q05722 Gm12072-201ENSMUST00000118293 715 ntBASIC11.94□□□□□ -0.5
Col9a1Q05722 Gm13315-201ENSMUST00000120376 991 ntBASIC11.94□□□□□ -0.5
Col9a1Q05722 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a1Q05722 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a1Q05722 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a1Q05722 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC11.94□□□□□ -0.5
Col9a1Q05722 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC11.94□□□□□ -0.5
Col9a1Q05722 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC11.94□□□□□ -0.5
Col9a1Q05722 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC11.94□□□□□ -0.5
Col9a1Q05722 Gm42937-201ENSMUST00000197360 752 ntBASIC11.94□□□□□ -0.5
Col9a1Q05722 Gm5885-202ENSMUST00000203357 528 ntBASIC11.94□□□□□ -0.5
Col9a1Q05722 Gm44128-201ENSMUST00000204909 219 ntBASIC11.94□□□□□ -0.5
Col9a1Q05722 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC11.94□□□□□ -0.5
Col9a1Q05722 Gm45240-201ENSMUST00000211437 674 ntBASIC11.94□□□□□ -0.5
Col9a1Q05722 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a1Q05722 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC11.94□□□□□ -0.5
Col9a1Q05722 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a1Q05722 AC107711.3-201ENSMUST00000228939 1035 ntBASIC11.94□□□□□ -0.5
Col9a1Q05722 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a1Q05722 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC11.94□□□□□ -0.5
Col9a1Q05722 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a1Q05722 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Col9a1Q05722 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Col9a1Q05722 Gm5292-201ENSMUST00000073317 580 ntBASIC11.94□□□□□ -0.5
Col9a1Q05722 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Col9a1Q05722 Olfr1115-201ENSMUST00000081986 1102 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Col9a1Q05722 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Col9a1Q05722 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Col9a1Q05722 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a1Q05722 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Col9a1Q05722 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a1Q05722 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.94□□□□□ -0.5
Col9a1Q05722 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a1Q05722 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Col9a1Q05722 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a1Q05722 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a1Q05722 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.94□□□□□ -0.5
Col9a1Q05722 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Col9a1Q05722 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a1Q05722 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col9a1Q05722 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC11.94□□□□□ -0.5
Col9a1Q05722 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms