Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Gm11425-201ENSMUST00000119608 498 ntBASIC11.19□□□□□ -0.62
Cxcr5Q04683 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Gm11793-201ENSMUST00000120433 981 ntBASIC11.19□□□□□ -0.62
Cxcr5Q04683 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Gm13786-201ENSMUST00000122371 333 ntBASIC11.19□□□□□ -0.62
Cxcr5Q04683 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Gm26956-201ENSMUST00000182176 986 ntBASIC11.19□□□□□ -0.62
Cxcr5Q04683 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Gm37489-201ENSMUST00000191883 159 ntBASIC11.19□□□□□ -0.62
Cxcr5Q04683 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.19□□□□□ -0.62
Cxcr5Q04683 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.19□□□□□ -0.62
Cxcr5Q04683 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.19□□□□□ -0.62
Cxcr5Q04683 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.19□□□□□ -0.62
Cxcr5Q04683 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Gm8712-201ENSMUST00000221090 701 ntBASIC11.19□□□□□ -0.62
Cxcr5Q04683 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.19□□□□□ -0.62
Cxcr5Q04683 Lect2-202ENSMUST00000225183 823 ntBASIC11.19□□□□□ -0.62
Cxcr5Q04683 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Gm9396-201ENSMUST00000076703 567 ntBASIC11.19□□□□□ -0.62
Cxcr5Q04683 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.19□□□□□ -0.62
Cxcr5Q04683 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.19□□□□□ -0.62
Cxcr5Q04683 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cxcr5Q04683 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cxcr5Q04683 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.18□□□□□ -0.62
Cxcr5Q04683 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Gm10254-201ENSMUST00000052888 867 ntBASIC11.18□□□□□ -0.62
Cxcr5Q04683 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.18□□□□□ -0.62
Cxcr5Q04683 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cxcr5Q04683 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.17□□□□□ -0.62
Cxcr5Q04683 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.17□□□□□ -0.62
Cxcr5Q04683 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.17□□□□□ -0.62
Cxcr5Q04683 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.17□□□□□ -0.62
Cxcr5Q04683 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cxcr5Q04683 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 108.3 ms