Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.09□□□□□ -0.79
Smn1P97801 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.09□□□□□ -0.79
Smn1P97801 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smn1P97801 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.09□□□□□ -0.79
Smn1P97801 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smn1P97801 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smn1P97801 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.09□□□□□ -0.79
Smn1P97801 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Smn1P97801 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Smn1P97801 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Smn1P97801 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Smn1P97801 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smn1P97801 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smn1P97801 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Smn1P97801 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smn1P97801 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Smn1P97801 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Smn1P97801 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smn1P97801 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smn1P97801 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smn1P97801 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smn1P97801 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Smn1P97801 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smn1P97801 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smn1P97801 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smn1P97801 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smn1P97801 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smn1P97801 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smn1P97801 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smn1P97801 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Smn1P97801 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smn1P97801 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smn1P97801 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smn1P97801 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smn1P97801 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.09□□□□□ -0.79
Smn1P97801 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Smn1P97801 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smn1P97801 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.09□□□□□ -0.79
Smn1P97801 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Smn1P97801 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
Smn1P97801 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Smn1P97801 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.08□□□□□ -0.8
Smn1P97801 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Smn1P97801 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.08□□□□□ -0.8
Smn1P97801 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Smn1P97801 Gm11478-201ENSMUST00000117851 599 ntBASIC10.08□□□□□ -0.8
Smn1P97801 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.08□□□□□ -0.8
Smn1P97801 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.08□□□□□ -0.8
Smn1P97801 Gm25043-201ENSMUST00000158604 212 ntBASIC10.08□□□□□ -0.8
Smn1P97801 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Smn1P97801 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.08□□□□□ -0.8
Smn1P97801 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.08□□□□□ -0.8
Smn1P97801 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.08□□□□□ -0.8
Smn1P97801 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Gm9996-201ENSMUST00000070359 913 ntBASIC10.08□□□□□ -0.8
Smn1P97801 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Smn1P97801 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Smn1P97801 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Smn1P97801 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.08□□□□□ -0.8
Smn1P97801 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Smn1P97801 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Smn1P97801 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.08□□□□□ -0.8
Smn1P97801 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Smn1P97801 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.08□□□□□ -0.8
Smn1P97801 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Smn1P97801 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.08□□□□□ -0.8
Smn1P97801 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.08□□□□□ -0.8
Smn1P97801 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.08□□□□□ -0.8
Smn1P97801 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smn1P97801 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smn1P97801 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms