Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Thumpd3P97770 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd3P97770 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd3P97770 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd3P97770 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.02□□□□□ -0.49
Thumpd3P97770 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thumpd3P97770 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd3P97770 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd3P97770 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd3P97770 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd3P97770 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.01□□□□□ -0.49
Thumpd3P97770 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.01□□□□□ -0.49
Thumpd3P97770 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd3P97770 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd3P97770 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd3P97770 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.01□□□□□ -0.49
Thumpd3P97770 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.01□□□□□ -0.49
Thumpd3P97770 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd3P97770 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd3P97770 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd3P97770 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd3P97770 Gm25214-201ENSMUST00000104573 129 ntBASIC12.01□□□□□ -0.49
Thumpd3P97770 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Thumpd3P97770 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.01□□□□□ -0.49
Thumpd3P97770 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.01□□□□□ -0.49
Thumpd3P97770 Gm12036-201ENSMUST00000120008 530 ntBASIC12.01□□□□□ -0.49
Thumpd3P97770 Gm15547-201ENSMUST00000122152 333 ntBASIC12.01□□□□□ -0.49
Thumpd3P97770 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd3P97770 Gm15276-201ENSMUST00000145953 498 ntBASIC12.01□□□□□ -0.49
Thumpd3P97770 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.01□□□□□ -0.49
Thumpd3P97770 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Thumpd3P97770 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd3P97770 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.01□□□□□ -0.49
Thumpd3P97770 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.01□□□□□ -0.49
Thumpd3P97770 Gm26461-201ENSMUST00000175064 290 ntBASIC12.01□□□□□ -0.49
Thumpd3P97770 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.01□□□□□ -0.49
Thumpd3P97770 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Thumpd3P97770 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.01□□□□□ -0.49
Thumpd3P97770 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.01□□□□□ -0.49
Thumpd3P97770 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.01□□□□□ -0.49
Thumpd3P97770 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.01□□□□□ -0.49
Thumpd3P97770 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd3P97770 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd3P97770 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd3P97770 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.01□□□□□ -0.49
Thumpd3P97770 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd3P97770 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd3P97770 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Thumpd3P97770 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd3P97770 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd3P97770 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Thumpd3P97770 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd3P97770 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.01□□□□□ -0.49
Thumpd3P97770 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd3P97770 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd3P97770 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Thumpd3P97770 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12□□□□□ -0.49
Thumpd3P97770 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd3P97770 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Thumpd3P97770 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12□□□□□ -0.49
Thumpd3P97770 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd3P97770 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd3P97770 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Thumpd3P97770 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12□□□□□ -0.49
Thumpd3P97770 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd3P97770 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12□□□□□ -0.49
Thumpd3P97770 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd3P97770 Gm23912-201ENSMUST00000104687 87 ntBASIC12□□□□□ -0.49
Thumpd3P97770 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd3P97770 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd3P97770 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd3P97770 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12□□□□□ -0.49
Thumpd3P97770 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Thumpd3P97770 Gm27046-201ENSMUST00000182160 463 ntBASIC12□□□□□ -0.49
Thumpd3P97770 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12□□□□□ -0.49
Thumpd3P97770 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12□□□□□ -0.49
Thumpd3P97770 Gm9678-201ENSMUST00000198979 1149 ntBASIC12□□□□□ -0.49
Thumpd3P97770 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12□□□□□ -0.49
Thumpd3P97770 Gm44967-201ENSMUST00000207047 631 ntBASIC12□□□□□ -0.49
Thumpd3P97770 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd3P97770 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12□□□□□ -0.49
Thumpd3P97770 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd3P97770 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd3P97770 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12□□□□□ -0.49
Thumpd3P97770 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12□□□□□ -0.49
Thumpd3P97770 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Thumpd3P97770 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12□□□□□ -0.49
Thumpd3P97770 Gm38194-201ENSMUST00000194529 2211 ntBASIC12□□□□□ -0.49
Thumpd3P97770 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd3P97770 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Thumpd3P97770 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Thumpd3P97770 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd3P97770 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd3P97770 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd3P97770 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd3P97770 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12□□□□□ -0.49
Thumpd3P97770 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Thumpd3P97770 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12□□□□□ -0.49
Thumpd3P97770 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12□□□□□ -0.49
Thumpd3P97770 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms