Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcc1P97496 Gm11560-201ENSMUST00000117567 948 ntBASIC14.76□□□□□ -0.05
Smarcc1P97496 Gm12218-201ENSMUST00000117666 399 ntBASIC14.76□□□□□ -0.05
Smarcc1P97496 Gm12274-201ENSMUST00000120062 385 ntBASIC14.76□□□□□ -0.05
Smarcc1P97496 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcc1P97496 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC14.76□□□□□ -0.05
Smarcc1P97496 Gm24248-201ENSMUST00000157321 322 ntBASIC14.76□□□□□ -0.05
Smarcc1P97496 Gm8451-201ENSMUST00000170338 447 ntBASIC14.76□□□□□ -0.05
Smarcc1P97496 Gm19587-201ENSMUST00000191395 545 ntBASIC14.76□□□□□ -0.05
Smarcc1P97496 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC14.76□□□□□ -0.05
Smarcc1P97496 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Smarcc1P97496 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcc1P97496 Gm45592-201ENSMUST00000209605 1043 ntBASIC14.76□□□□□ -0.05
Smarcc1P97496 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC14.76□□□□□ -0.05
Smarcc1P97496 AC153929.1-201ENSMUST00000219009 303 ntBASIC14.76□□□□□ -0.05
Smarcc1P97496 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC14.76□□□□□ -0.05
Smarcc1P97496 CT573086.4-201ENSMUST00000226729 342 ntBASIC14.76□□□□□ -0.05
Smarcc1P97496 Gm7536-201ENSMUST00000077389 444 ntBASIC14.76□□□□□ -0.05
Smarcc1P97496 Gm5453-201ENSMUST00000080866 447 ntBASIC14.76□□□□□ -0.05
Smarcc1P97496 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcc1P97496 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcc1P97496 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcc1P97496 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Smarcc1P97496 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcc1P97496 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcc1P97496 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarcc1P97496 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcc1P97496 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcc1P97496 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcc1P97496 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC14.75□□□□□ -0.05
Smarcc1P97496 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcc1P97496 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcc1P97496 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcc1P97496 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcc1P97496 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcc1P97496 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcc1P97496 Cog3-203ENSMUST00000227473 4197 ntBASIC14.75□□□□□ -0.05
Smarcc1P97496 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcc1P97496 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
Smarcc1P97496 Gm11979-201ENSMUST00000119629 743 ntBASIC14.75□□□□□ -0.05
Smarcc1P97496 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC14.75□□□□□ -0.05
Smarcc1P97496 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcc1P97496 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC14.75□□□□□ -0.05
Smarcc1P97496 Gm37638-201ENSMUST00000194337 1123 ntBASIC14.75□□□□□ -0.05
Smarcc1P97496 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcc1P97496 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC14.75□□□□□ -0.05
Smarcc1P97496 CT025602.2-201ENSMUST00000226553 772 ntBASIC14.75□□□□□ -0.05
Smarcc1P97496 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Smarcc1P97496 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcc1P97496 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Smarcc1P97496 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Smarcc1P97496 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Smarcc1P97496 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcc1P97496 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Smarcc1P97496 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC14.75□□□□□ -0.05
Smarcc1P97496 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcc1P97496 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcc1P97496 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcc1P97496 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smarcc1P97496 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.75□□□□□ -0.05
Smarcc1P97496 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.74□□□□□ -0.05
Smarcc1P97496 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc1P97496 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.74□□□□□ -0.05
Smarcc1P97496 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc1P97496 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc1P97496 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc1P97496 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc1P97496 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Smarcc1P97496 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc1P97496 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc1P97496 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Smarcc1P97496 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc1P97496 Gm14274-201ENSMUST00000117182 615 ntBASIC14.74□□□□□ -0.05
Smarcc1P97496 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc1P97496 Gm15003-201ENSMUST00000118884 446 ntBASIC14.74□□□□□ -0.05
Smarcc1P97496 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC14.74□□□□□ -0.05
Smarcc1P97496 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc1P97496 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Smarcc1P97496 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC14.74□□□□□ -0.05
Smarcc1P97496 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC14.74□□□□□ -0.05
Smarcc1P97496 Gm43163-201ENSMUST00000196571 442 ntBASIC14.74□□□□□ -0.05
Smarcc1P97496 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Smarcc1P97496 Gm7082-201ENSMUST00000209880 969 ntBASIC14.74□□□□□ -0.05
Smarcc1P97496 CT573047.1-201ENSMUST00000223652 851 ntBASIC14.74□□□□□ -0.05
Smarcc1P97496 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc1P97496 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Smarcc1P97496 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Smarcc1P97496 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC14.74□□□□□ -0.05
Smarcc1P97496 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Smarcc1P97496 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.74□□□□□ -0.05
Smarcc1P97496 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc1P97496 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc1P97496 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc1P97496 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcc1P97496 Gm18642-201ENSMUST00000206642 1400 ntBASIC14.74□□□□□ -0.05
Smarcc1P97496 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Smarcc1P97496 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcc1P97496 AC158636.1-201ENSMUST00000220118 1393 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 362.4 ms