Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.58□□□□□ -0.72
SgcbP82349 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
SgcbP82349 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
SgcbP82349 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
SgcbP82349 Gm12857-201ENSMUST00000117678 592 ntBASIC10.57□□□□□ -0.72
SgcbP82349 Gm12196-201ENSMUST00000120954 262 ntBASIC10.57□□□□□ -0.72
SgcbP82349 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
SgcbP82349 Gm27552-201ENSMUST00000183351 62 ntBASIC10.57□□□□□ -0.72
SgcbP82349 Gm27844-201ENSMUST00000183613 62 ntBASIC10.57□□□□□ -0.72
SgcbP82349 Gm3332-201ENSMUST00000189337 928 ntBASIC10.57□□□□□ -0.72
SgcbP82349 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.57□□□□□ -0.72
SgcbP82349 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.57□□□□□ -0.72
SgcbP82349 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
SgcbP82349 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.57□□□□□ -0.72
SgcbP82349 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
SgcbP82349 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Gm44241-201ENSMUST00000203230 1662 ntBASIC10.57□□□□□ -0.72
SgcbP82349 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.57□□□□□ -0.72
SgcbP82349 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
SgcbP82349 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SgcbP82349 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SgcbP82349 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.56□□□□□ -0.72
SgcbP82349 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.56□□□□□ -0.72
SgcbP82349 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcbP82349 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcbP82349 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.56□□□□□ -0.72
SgcbP82349 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
SgcbP82349 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
SgcbP82349 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcbP82349 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.56□□□□□ -0.72
SgcbP82349 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
SgcbP82349 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SgcbP82349 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
SgcbP82349 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
SgcbP82349 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.56□□□□□ -0.72
SgcbP82349 Gm9797-202ENSMUST00000218003 294 ntBASIC10.56□□□□□ -0.72
SgcbP82349 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.56□□□□□ -0.72
SgcbP82349 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcbP82349 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcbP82349 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcbP82349 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcbP82349 Gm21811-201ENSMUST00000096485 930 ntBASIC10.56□□□□□ -0.72
SgcbP82349 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SgcbP82349 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SgcbP82349 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SgcbP82349 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcbP82349 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
SgcbP82349 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
SgcbP82349 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SgcbP82349 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcbP82349 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcbP82349 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.56□□□□□ -0.72
SgcbP82349 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcbP82349 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcbP82349 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
SgcbP82349 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
SgcbP82349 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SgcbP82349 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.56□□□□□ -0.72
SgcbP82349 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
SgcbP82349 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.55□□□□□ -0.72
SgcbP82349 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
SgcbP82349 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.55□□□□□ -0.72
SgcbP82349 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.55□□□□□ -0.72
SgcbP82349 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SgcbP82349 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms