Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CiitaP79621 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
CiitaP79621 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CiitaP79621 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CiitaP79621 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CiitaP79621 Gm14585-201ENSMUST00000120713 634 ntBASIC12.78□□□□□ -0.36
CiitaP79621 Gm11836-201ENSMUST00000121022 441 ntBASIC12.78□□□□□ -0.36
CiitaP79621 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CiitaP79621 Gm23045-201ENSMUST00000175041 96 ntBASIC12.78□□□□□ -0.36
CiitaP79621 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.78□□□□□ -0.36
CiitaP79621 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.78□□□□□ -0.36
CiitaP79621 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.78□□□□□ -0.36
CiitaP79621 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.78□□□□□ -0.36
CiitaP79621 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CiitaP79621 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CiitaP79621 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CiitaP79621 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CiitaP79621 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CiitaP79621 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CiitaP79621 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CiitaP79621 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CiitaP79621 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.78□□□□□ -0.36
CiitaP79621 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.78□□□□□ -0.36
CiitaP79621 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.78□□□□□ -0.36
CiitaP79621 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CiitaP79621 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CiitaP79621 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
CiitaP79621 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CiitaP79621 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CiitaP79621 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CiitaP79621 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CiitaP79621 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.78□□□□□ -0.36
CiitaP79621 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.78□□□□□ -0.36
CiitaP79621 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CiitaP79621 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CiitaP79621 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.78□□□□□ -0.36
CiitaP79621 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CiitaP79621 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CiitaP79621 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
CiitaP79621 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CiitaP79621 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CiitaP79621 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CiitaP79621 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.77□□□□□ -0.36
CiitaP79621 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.77□□□□□ -0.36
CiitaP79621 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.77□□□□□ -0.36
CiitaP79621 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CiitaP79621 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CiitaP79621 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CiitaP79621 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CiitaP79621 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CiitaP79621 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CiitaP79621 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CiitaP79621 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CiitaP79621 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CiitaP79621 Gm11949-201ENSMUST00000117640 372 ntBASIC12.77□□□□□ -0.37
CiitaP79621 Gm15131-201ENSMUST00000119124 595 ntBASIC12.77□□□□□ -0.37
CiitaP79621 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.77□□□□□ -0.37
CiitaP79621 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
CiitaP79621 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.77□□□□□ -0.37
CiitaP79621 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CiitaP79621 Gm21092-201ENSMUST00000178995 955 ntBASIC12.77□□□□□ -0.37
CiitaP79621 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.77□□□□□ -0.37
CiitaP79621 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CiitaP79621 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CiitaP79621 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.77□□□□□ -0.37
CiitaP79621 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CiitaP79621 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CiitaP79621 Gm29787-201ENSMUST00000222129 849 ntBASIC12.77□□□□□ -0.37
CiitaP79621 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CiitaP79621 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CiitaP79621 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.77□□□□□ -0.37
CiitaP79621 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CiitaP79621 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CiitaP79621 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CiitaP79621 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CiitaP79621 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CiitaP79621 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CiitaP79621 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CiitaP79621 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CiitaP79621 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CiitaP79621 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CiitaP79621 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CiitaP79621 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CiitaP79621 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CiitaP79621 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CiitaP79621 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CiitaP79621 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CiitaP79621 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.76□□□□□ -0.37
CiitaP79621 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CiitaP79621 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CiitaP79621 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CiitaP79621 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CiitaP79621 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CiitaP79621 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CiitaP79621 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CiitaP79621 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CiitaP79621 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CiitaP79621 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CiitaP79621 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.76□□□□□ -0.37
CiitaP79621 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms