Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.62□□□□□ -0.55
Shox2P70390 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shox2P70390 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shox2P70390 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Shox2P70390 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shox2P70390 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shox2P70390 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shox2P70390 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.62□□□□□ -0.55
Shox2P70390 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Shox2P70390 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shox2P70390 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shox2P70390 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shox2P70390 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Shox2P70390 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Shox2P70390 Gm12151-201ENSMUST00000121374 290 ntBASIC11.62□□□□□ -0.55
Shox2P70390 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.62□□□□□ -0.55
Shox2P70390 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.62□□□□□ -0.55
Shox2P70390 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shox2P70390 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shox2P70390 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.62□□□□□ -0.55
Shox2P70390 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.62□□□□□ -0.55
Shox2P70390 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shox2P70390 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shox2P70390 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shox2P70390 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.62□□□□□ -0.55
Shox2P70390 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shox2P70390 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shox2P70390 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shox2P70390 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shox2P70390 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Shox2P70390 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shox2P70390 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shox2P70390 Gm6092-201ENSMUST00000121659 2029 ntBASIC11.62□□□□□ -0.55
Shox2P70390 Rgr-203ENSMUST00000225070 4704 ntBASIC11.62□□□□□ -0.55
Shox2P70390 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shox2P70390 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shox2P70390 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shox2P70390 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shox2P70390 Gm6714-201ENSMUST00000218677 2330 ntBASIC11.61□□□□□ -0.55
Shox2P70390 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shox2P70390 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.61□□□□□ -0.55
Shox2P70390 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shox2P70390 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.61□□□□□ -0.55
Shox2P70390 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.61□□□□□ -0.55
Shox2P70390 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Shox2P70390 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shox2P70390 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shox2P70390 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shox2P70390 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shox2P70390 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shox2P70390 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shox2P70390 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.61□□□□□ -0.55
Shox2P70390 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shox2P70390 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Shox2P70390 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.61□□□□□ -0.55
Shox2P70390 Gm12164-201ENSMUST00000121695 551 ntBASIC11.61□□□□□ -0.55
Shox2P70390 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shox2P70390 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.61□□□□□ -0.55
Shox2P70390 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shox2P70390 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Shox2P70390 Gm7029-201ENSMUST00000173226 450 ntBASIC11.61□□□□□ -0.55
Shox2P70390 Gm37597-201ENSMUST00000191853 382 ntBASIC11.61□□□□□ -0.55
Shox2P70390 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.61□□□□□ -0.55
Shox2P70390 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.61□□□□□ -0.55
Shox2P70390 Gm18624-201ENSMUST00000220966 658 ntBASIC11.61□□□□□ -0.55
Shox2P70390 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.61□□□□□ -0.55
Shox2P70390 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shox2P70390 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shox2P70390 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shox2P70390 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shox2P70390 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shox2P70390 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Shox2P70390 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shox2P70390 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shox2P70390 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shox2P70390 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shox2P70390 Gm8320-201ENSMUST00000177584 1762 ntBASIC11.61□□□□□ -0.55
Shox2P70390 Gm8303-201ENSMUST00000178371 1762 ntBASIC11.61□□□□□ -0.55
Shox2P70390 Gm8331-201ENSMUST00000178433 1762 ntBASIC11.61□□□□□ -0.55
Shox2P70390 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shox2P70390 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shox2P70390 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shox2P70390 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Shox2P70390 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shox2P70390 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Shox2P70390 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.6□□□□□ -0.55
Shox2P70390 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Shox2P70390 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.6□□□□□ -0.55
Shox2P70390 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shox2P70390 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms