Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
PrkcbP68404 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.75□□□□□ -0.37
PrkcbP68404 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
PrkcbP68404 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PrkcbP68404 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
PrkcbP68404 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.75□□□□□ -0.37
PrkcbP68404 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PrkcbP68404 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PrkcbP68404 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
PrkcbP68404 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PrkcbP68404 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PrkcbP68404 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
PrkcbP68404 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
PrkcbP68404 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PrkcbP68404 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
PrkcbP68404 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
PrkcbP68404 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.75□□□□□ -0.37
PrkcbP68404 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkcbP68404 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
PrkcbP68404 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
PrkcbP68404 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkcbP68404 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkcbP68404 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.74□□□□□ -0.37
PrkcbP68404 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkcbP68404 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PrkcbP68404 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PrkcbP68404 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
PrkcbP68404 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PrkcbP68404 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.74□□□□□ -0.37
PrkcbP68404 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
PrkcbP68404 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
PrkcbP68404 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.74□□□□□ -0.37
PrkcbP68404 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkcbP68404 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkcbP68404 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
PrkcbP68404 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkcbP68404 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PrkcbP68404 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkcbP68404 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkcbP68404 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
PrkcbP68404 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PrkcbP68404 Gm11960-201ENSMUST00000122068 925 ntBASIC12.74□□□□□ -0.37
PrkcbP68404 Gm9550-201ENSMUST00000161130 862 ntBASIC12.74□□□□□ -0.37
PrkcbP68404 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PrkcbP68404 Gm24514-201ENSMUST00000174961 285 ntBASIC12.74□□□□□ -0.37
PrkcbP68404 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.74□□□□□ -0.37
PrkcbP68404 Gm5982-201ENSMUST00000196234 512 ntBASIC12.74□□□□□ -0.37
PrkcbP68404 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.74□□□□□ -0.37
PrkcbP68404 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkcbP68404 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkcbP68404 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkcbP68404 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PrkcbP68404 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkcbP68404 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkcbP68404 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
PrkcbP68404 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
PrkcbP68404 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
PrkcbP68404 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkcbP68404 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
PrkcbP68404 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkcbP68404 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
PrkcbP68404 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
PrkcbP68404 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PrkcbP68404 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PrkcbP68404 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PrkcbP68404 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PrkcbP68404 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
PrkcbP68404 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrkcbP68404 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrkcbP68404 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrkcbP68404 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PrkcbP68404 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrkcbP68404 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrkcbP68404 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrkcbP68404 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PrkcbP68404 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.73□□□□□ -0.37
PrkcbP68404 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
PrkcbP68404 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrkcbP68404 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrkcbP68404 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrkcbP68404 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrkcbP68404 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PrkcbP68404 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
PrkcbP68404 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrkcbP68404 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrkcbP68404 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.73□□□□□ -0.37
PrkcbP68404 Gm22920-201ENSMUST00000102175 109 ntBASIC12.73□□□□□ -0.37
PrkcbP68404 Gm14193-201ENSMUST00000105067 153 ntBASIC12.73□□□□□ -0.37
PrkcbP68404 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.73□□□□□ -0.37
PrkcbP68404 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrkcbP68404 Gm11956-201ENSMUST00000119525 512 ntBASIC12.73□□□□□ -0.37
PrkcbP68404 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PrkcbP68404 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
PrkcbP68404 Gm26047-201ENSMUST00000157308 113 ntBASIC12.73□□□□□ -0.37
PrkcbP68404 Gm3150-201ENSMUST00000166418 204 ntBASIC12.73□□□□□ -0.37
PrkcbP68404 Mir8093-201ENSMUST00000185043 137 ntBASIC12.73□□□□□ -0.37
PrkcbP68404 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
PrkcbP68404 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.73□□□□□ -0.37
PrkcbP68404 Gm26047-202ENSMUST00000198840 115 ntBASIC12.73□□□□□ -0.37
PrkcbP68404 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms