Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crnkl1P63154 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Crnkl1P63154 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.68□□□□□ -0.54
Crnkl1P63154 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Crnkl1P63154 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crnkl1P63154 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crnkl1P63154 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Crnkl1P63154 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Crnkl1P63154 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.68□□□□□ -0.54
Crnkl1P63154 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Crnkl1P63154 Gm4768-201ENSMUST00000206199 686 ntBASIC11.68□□□□□ -0.54
Crnkl1P63154 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.68□□□□□ -0.54
Crnkl1P63154 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crnkl1P63154 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Crnkl1P63154 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crnkl1P63154 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crnkl1P63154 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crnkl1P63154 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Crnkl1P63154 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crnkl1P63154 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Crnkl1P63154 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Crnkl1P63154 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crnkl1P63154 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.68□□□□□ -0.54
Crnkl1P63154 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crnkl1P63154 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crnkl1P63154 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crnkl1P63154 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.67□□□□□ -0.54
Crnkl1P63154 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.67□□□□□ -0.54
Crnkl1P63154 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Crnkl1P63154 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Crnkl1P63154 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.67□□□□□ -0.54
Crnkl1P63154 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Crnkl1P63154 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 Gm17208-201ENSMUST00000168388 535 ntBASIC11.67□□□□□ -0.54
Crnkl1P63154 Gm23363-201ENSMUST00000175024 79 ntBASIC11.67□□□□□ -0.54
Crnkl1P63154 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.67□□□□□ -0.54
Crnkl1P63154 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.67□□□□□ -0.54
Crnkl1P63154 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.67□□□□□ -0.54
Crnkl1P63154 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.67□□□□□ -0.54
Crnkl1P63154 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.67□□□□□ -0.54
Crnkl1P63154 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.67□□□□□ -0.54
Crnkl1P63154 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Crnkl1P63154 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.67□□□□□ -0.54
Crnkl1P63154 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Crnkl1P63154 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Crnkl1P63154 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Crnkl1P63154 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.66□□□□□ -0.54
Crnkl1P63154 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Crnkl1P63154 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.66□□□□□ -0.54
Crnkl1P63154 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Crnkl1P63154 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Crnkl1P63154 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Crnkl1P63154 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Crnkl1P63154 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Crnkl1P63154 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Crnkl1P63154 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Crnkl1P63154 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.66□□□□□ -0.54
Crnkl1P63154 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Crnkl1P63154 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Crnkl1P63154 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Crnkl1P63154 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Crnkl1P63154 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Crnkl1P63154 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.66□□□□□ -0.54
Crnkl1P63154 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.66□□□□□ -0.54
Crnkl1P63154 Gm8062-201ENSMUST00000139696 444 ntBASIC11.66□□□□□ -0.54
Crnkl1P63154 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Crnkl1P63154 Gm17420-201ENSMUST00000164753 153 ntBASIC11.66□□□□□ -0.54
Crnkl1P63154 Gm7029-201ENSMUST00000173226 450 ntBASIC11.66□□□□□ -0.54
Crnkl1P63154 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.66□□□□□ -0.54
Crnkl1P63154 Gm8099-201ENSMUST00000200510 742 ntBASIC11.66□□□□□ -0.54
Crnkl1P63154 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Crnkl1P63154 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Crnkl1P63154 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Crnkl1P63154 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Crnkl1P63154 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms