Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ThraP63058 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ThraP63058 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
ThraP63058 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.98□□□□□ -0.49
ThraP63058 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ThraP63058 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.98□□□□□ -0.49
ThraP63058 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ThraP63058 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ThraP63058 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ThraP63058 Gm8959-201ENSMUST00000213150 571 ntBASIC11.98□□□□□ -0.49
ThraP63058 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.98□□□□□ -0.49
ThraP63058 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ThraP63058 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ThraP63058 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ThraP63058 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ThraP63058 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ThraP63058 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.98□□□□□ -0.49
ThraP63058 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
ThraP63058 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ThraP63058 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.98□□□□□ -0.49
ThraP63058 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
ThraP63058 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ThraP63058 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ThraP63058 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.98□□□□□ -0.49
ThraP63058 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
ThraP63058 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
ThraP63058 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.97□□□□□ -0.49
ThraP63058 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.97□□□□□ -0.49
ThraP63058 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.97□□□□□ -0.49
ThraP63058 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.97□□□□□ -0.49
ThraP63058 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.97□□□□□ -0.49
ThraP63058 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Gm29615-201ENSMUST00000185371 697 ntBASIC11.97□□□□□ -0.49
ThraP63058 Gm28224-201ENSMUST00000186078 697 ntBASIC11.97□□□□□ -0.49
ThraP63058 Gm29001-201ENSMUST00000186177 697 ntBASIC11.97□□□□□ -0.49
ThraP63058 Gm28292-201ENSMUST00000186593 697 ntBASIC11.97□□□□□ -0.49
ThraP63058 Gm28101-201ENSMUST00000187608 697 ntBASIC11.97□□□□□ -0.49
ThraP63058 Gm29076-201ENSMUST00000187689 697 ntBASIC11.97□□□□□ -0.49
ThraP63058 Gm28302-201ENSMUST00000187931 697 ntBASIC11.97□□□□□ -0.49
ThraP63058 Gm28646-201ENSMUST00000188220 697 ntBASIC11.97□□□□□ -0.49
ThraP63058 Gm28205-201ENSMUST00000189177 697 ntBASIC11.97□□□□□ -0.49
ThraP63058 Gm29032-201ENSMUST00000189797 697 ntBASIC11.97□□□□□ -0.49
ThraP63058 Gm28695-201ENSMUST00000190300 697 ntBASIC11.97□□□□□ -0.49
ThraP63058 Gm37448-201ENSMUST00000192795 697 ntBASIC11.97□□□□□ -0.49
ThraP63058 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
ThraP63058 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.97□□□□□ -0.49
ThraP63058 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.97□□□□□ -0.49
ThraP63058 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
ThraP63058 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
ThraP63058 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.97□□□□□ -0.49
ThraP63058 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
ThraP63058 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.97□□□□□ -0.49
ThraP63058 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.97□□□□□ -0.49
ThraP63058 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
ThraP63058 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ThraP63058 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ThraP63058 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ThraP63058 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
ThraP63058 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ThraP63058 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ThraP63058 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
ThraP63058 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.96□□□□□ -0.49
ThraP63058 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ThraP63058 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
ThraP63058 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ThraP63058 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ThraP63058 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms