Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ybx1P62960 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Ybx1P62960 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ybx1P62960 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ybx1P62960 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ybx1P62960 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ybx1P62960 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ybx1P62960 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ybx1P62960 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.09□□□□□ -0.47
Ybx1P62960 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.09□□□□□ -0.47
Ybx1P62960 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Ybx1P62960 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Ybx1P62960 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ybx1P62960 Gm11783-201ENSMUST00000119549 885 ntBASIC12.09□□□□□ -0.47
Ybx1P62960 Gm7150-201ENSMUST00000122032 981 ntBASIC12.09□□□□□ -0.47
Ybx1P62960 Gm12628-201ENSMUST00000122193 382 ntBASIC12.09□□□□□ -0.47
Ybx1P62960 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Ybx1P62960 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ybx1P62960 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.09□□□□□ -0.47
Ybx1P62960 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ybx1P62960 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Ybx1P62960 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ybx1P62960 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.09□□□□□ -0.47
Ybx1P62960 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ybx1P62960 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ybx1P62960 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ybx1P62960 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ybx1P62960 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ybx1P62960 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ybx1P62960 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ybx1P62960 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ybx1P62960 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ybx1P62960 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ybx1P62960 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ybx1P62960 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.08□□□□□ -0.48
Ybx1P62960 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ybx1P62960 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.08□□□□□ -0.48
Ybx1P62960 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ybx1P62960 Gm14942-201ENSMUST00000119642 336 ntBASIC12.08□□□□□ -0.48
Ybx1P62960 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.08□□□□□ -0.48
Ybx1P62960 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ybx1P62960 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.08□□□□□ -0.48
Ybx1P62960 Gm45594-201ENSMUST00000211717 241 ntBASIC12.08□□□□□ -0.48
Ybx1P62960 Gm19009-201ENSMUST00000223072 823 ntBASIC12.08□□□□□ -0.48
Ybx1P62960 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ybx1P62960 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ybx1P62960 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.08□□□□□ -0.48
Ybx1P62960 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ybx1P62960 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.08□□□□□ -0.48
Ybx1P62960 Olfr584-201ENSMUST00000098210 964 ntBASIC12.08□□□□□ -0.48
Ybx1P62960 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ybx1P62960 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ybx1P62960 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ybx1P62960 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.08□□□□□ -0.48
Ybx1P62960 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ybx1P62960 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ybx1P62960 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Ybx1P62960 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ybx1P62960 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.08□□□□□ -0.48
Ybx1P62960 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ybx1P62960 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ybx1P62960 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ybx1P62960 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ybx1P62960 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ybx1P62960 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ybx1P62960 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ybx1P62960 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ybx1P62960 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ybx1P62960 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Ybx1P62960 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ybx1P62960 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.07□□□□□ -0.48
Ybx1P62960 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ybx1P62960 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms