Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.38□□□□□ -0.75
Lsm6P62313 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm6P62313 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Lsm6P62313 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm6P62313 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.38□□□□□ -0.75
Lsm6P62313 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm6P62313 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm6P62313 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm6P62313 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.38□□□□□ -0.75
Lsm6P62313 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm6P62313 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm6P62313 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.38□□□□□ -0.75
Lsm6P62313 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.38□□□□□ -0.75
Lsm6P62313 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm6P62313 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm6P62313 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm6P62313 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm6P62313 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.38□□□□□ -0.75
Lsm6P62313 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm6P62313 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Lsm6P62313 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Lsm6P62313 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Lsm6P62313 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Lsm6P62313 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.37□□□□□ -0.75
Lsm6P62313 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 Gm13996-201ENSMUST00000118456 430 ntBASIC10.37□□□□□ -0.75
Lsm6P62313 Gm13350-201ENSMUST00000120519 479 ntBASIC10.37□□□□□ -0.75
Lsm6P62313 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.37□□□□□ -0.75
Lsm6P62313 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.37□□□□□ -0.75
Lsm6P62313 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 Gm27627-201ENSMUST00000183644 150 ntBASIC10.37□□□□□ -0.75
Lsm6P62313 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.37□□□□□ -0.75
Lsm6P62313 Gm38314-201ENSMUST00000195709 625 ntBASIC10.37□□□□□ -0.75
Lsm6P62313 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.37□□□□□ -0.75
Lsm6P62313 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.37□□□□□ -0.75
Lsm6P62313 Gm17812-201ENSMUST00000204935 318 ntBASIC10.37□□□□□ -0.75
Lsm6P62313 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 Gm4157-201ENSMUST00000211647 679 ntBASIC10.37□□□□□ -0.75
Lsm6P62313 Gm17827-201ENSMUST00000211825 742 ntBASIC10.37□□□□□ -0.75
Lsm6P62313 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.37□□□□□ -0.75
Lsm6P62313 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.37□□□□□ -0.75
Lsm6P62313 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Lsm6P62313 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm6P62313 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.36□□□□□ -0.75
Lsm6P62313 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Lsm6P62313 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.36□□□□□ -0.75
Lsm6P62313 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.36□□□□□ -0.75
Lsm6P62313 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.36□□□□□ -0.75
Lsm6P62313 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Lsm6P62313 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Lsm6P62313 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Lsm6P62313 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Lsm6P62313 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.36□□□□□ -0.75
Lsm6P62313 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.36□□□□□ -0.75
Lsm6P62313 Gm11960-201ENSMUST00000122068 925 ntBASIC10.36□□□□□ -0.75
Lsm6P62313 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.36□□□□□ -0.75
Lsm6P62313 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm6P62313 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.36□□□□□ -0.75
Lsm6P62313 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Lsm6P62313 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.36□□□□□ -0.75
Lsm6P62313 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms