Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a1P61620 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.42□□□□□ -0.74
Sec61a1P61620 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a1P61620 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Sec61a1P61620 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Sec61a1P61620 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a1P61620 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.42□□□□□ -0.74
Sec61a1P61620 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Sec61a1P61620 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a1P61620 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.42□□□□□ -0.74
Sec61a1P61620 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Sec61a1P61620 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Sec61a1P61620 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a1P61620 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a1P61620 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Sec61a1P61620 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a1P61620 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.41□□□□□ -0.74
Sec61a1P61620 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Sec61a1P61620 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.41□□□□□ -0.74
Sec61a1P61620 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.41□□□□□ -0.74
Sec61a1P61620 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.41□□□□□ -0.74
Sec61a1P61620 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Sec61a1P61620 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Sec61a1P61620 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Sec61a1P61620 Gm23270-201ENSMUST00000104055 131 ntBASIC10.41□□□□□ -0.74
Sec61a1P61620 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Sec61a1P61620 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.41□□□□□ -0.74
Sec61a1P61620 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Sec61a1P61620 Gm13736-201ENSMUST00000119272 253 ntBASIC10.41□□□□□ -0.74
Sec61a1P61620 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.41□□□□□ -0.74
Sec61a1P61620 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Sec61a1P61620 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.41□□□□□ -0.74
Sec61a1P61620 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.41□□□□□ -0.74
Sec61a1P61620 Gm4857-201ENSMUST00000192718 785 ntBASIC10.41□□□□□ -0.74
Sec61a1P61620 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.41□□□□□ -0.74
Sec61a1P61620 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.41□□□□□ -0.74
Sec61a1P61620 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.41□□□□□ -0.74
Sec61a1P61620 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.41□□□□□ -0.74
Sec61a1P61620 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.41□□□□□ -0.74
Sec61a1P61620 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.41□□□□□ -0.74
Sec61a1P61620 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Sec61a1P61620 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.41□□□□□ -0.74
Sec61a1P61620 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a1P61620 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.4□□□□□ -0.74
Sec61a1P61620 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Sec61a1P61620 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Sec61a1P61620 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Sec61a1P61620 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.4□□□□□ -0.74
Sec61a1P61620 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Sec61a1P61620 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms