Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Tpm1P58771 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tpm1P58771 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tpm1P58771 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tpm1P58771 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tpm1P58771 Gm11591-201ENSMUST00000120063 702 ntBASIC13.14□□□□□ -0.31
Tpm1P58771 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tpm1P58771 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tpm1P58771 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Tpm1P58771 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tpm1P58771 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.14□□□□□ -0.31
Tpm1P58771 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tpm1P58771 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tpm1P58771 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Tpm1P58771 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Tpm1P58771 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tpm1P58771 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tpm1P58771 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tpm1P58771 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tpm1P58771 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Tpm1P58771 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC13.14□□□□□ -0.31
Tpm1P58771 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tpm1P58771 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tpm1P58771 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tpm1P58771 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tpm1P58771 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tpm1P58771 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tpm1P58771 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tpm1P58771 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tpm1P58771 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tpm1P58771 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Tpm1P58771 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Tpm1P58771 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Tpm1P58771 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tpm1P58771 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.13□□□□□ -0.31
Tpm1P58771 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.13□□□□□ -0.31
Tpm1P58771 Gm12058-201ENSMUST00000118614 437 ntBASIC13.13□□□□□ -0.31
Tpm1P58771 Gm15610-201ENSMUST00000120584 195 ntBASIC13.13□□□□□ -0.31
Tpm1P58771 Gm16177-201ENSMUST00000120728 718 ntBASIC13.13□□□□□ -0.31
Tpm1P58771 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.13□□□□□ -0.31
Tpm1P58771 Gm7809-201ENSMUST00000153199 742 ntBASIC13.13□□□□□ -0.31
Tpm1P58771 Gm16379-201ENSMUST00000161469 348 ntBASIC13.13□□□□□ -0.31
Tpm1P58771 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Tpm1P58771 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tpm1P58771 Gm9136-201ENSMUST00000193368 454 ntBASIC13.13□□□□□ -0.31
Tpm1P58771 Gm8762-201ENSMUST00000193486 339 ntBASIC13.13□□□□□ -0.31
Tpm1P58771 Gm42937-201ENSMUST00000197360 752 ntBASIC13.13□□□□□ -0.31
Tpm1P58771 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tpm1P58771 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Tpm1P58771 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tpm1P58771 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tpm1P58771 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tpm1P58771 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tpm1P58771 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tpm1P58771 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tpm1P58771 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tpm1P58771 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tpm1P58771 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tpm1P58771 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tpm1P58771 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tpm1P58771 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.12□□□□□ -0.31
Tpm1P58771 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tpm1P58771 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tpm1P58771 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.12□□□□□ -0.31
Tpm1P58771 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tpm1P58771 Gm3890-201ENSMUST00000182416 207 ntBASIC13.12□□□□□ -0.31
Tpm1P58771 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tpm1P58771 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tpm1P58771 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.12□□□□□ -0.31
Tpm1P58771 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tpm1P58771 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tpm1P58771 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tpm1P58771 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tpm1P58771 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tpm1P58771 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tpm1P58771 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tpm1P58771 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tpm1P58771 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tpm1P58771 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Tpm1P58771 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.12□□□□□ -0.31
Tpm1P58771 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Tpm1P58771 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Tpm1P58771 Gm37969-201ENSMUST00000195777 3409 ntBASIC13.11□□□□□ -0.31
Tpm1P58771 Gm6560-201ENSMUST00000198588 1591 ntBASIC13.11□□□□□ -0.31
Tpm1P58771 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tpm1P58771 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tpm1P58771 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Tpm1P58771 Gm43773-201ENSMUST00000198548 2162 ntBASIC13.11□□□□□ -0.31
Tpm1P58771 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tpm1P58771 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tpm1P58771 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tpm1P58771 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tpm1P58771 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Tpm1P58771 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC13.11□□□□□ -0.31
Tpm1P58771 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tpm1P58771 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tpm1P58771 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Tpm1P58771 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tpm1P58771 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.11□□□□□ -0.31
Tpm1P58771 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms