Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NcanP55066 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NcanP55066 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NcanP55066 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
NcanP55066 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NcanP55066 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NcanP55066 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NcanP55066 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NcanP55066 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
NcanP55066 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NcanP55066 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.4□□□□□ -0.42
NcanP55066 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NcanP55066 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
NcanP55066 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
NcanP55066 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
NcanP55066 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.43
NcanP55066 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
NcanP55066 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
NcanP55066 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NcanP55066 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
NcanP55066 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NcanP55066 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
NcanP55066 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NcanP55066 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
NcanP55066 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.39□□□□□ -0.43
NcanP55066 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
NcanP55066 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.39□□□□□ -0.43
NcanP55066 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
NcanP55066 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NcanP55066 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
NcanP55066 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NcanP55066 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NcanP55066 Gm11993-201ENSMUST00000121861 820 ntBASIC12.39□□□□□ -0.43
NcanP55066 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC12.39□□□□□ -0.43
NcanP55066 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC12.39□□□□□ -0.43
NcanP55066 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NcanP55066 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.39□□□□□ -0.43
NcanP55066 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NcanP55066 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC12.39□□□□□ -0.43
NcanP55066 Gm9369-201ENSMUST00000196009 733 ntBASIC12.39□□□□□ -0.43
NcanP55066 Gm8255-201ENSMUST00000218693 305 ntBASIC12.39□□□□□ -0.43
NcanP55066 AC164099.1-201ENSMUST00000227780 333 ntBASIC12.39□□□□□ -0.43
NcanP55066 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
NcanP55066 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NcanP55066 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
NcanP55066 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NcanP55066 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NcanP55066 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NcanP55066 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
NcanP55066 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NcanP55066 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.39□□□□□ -0.43
NcanP55066 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.39□□□□□ -0.43
NcanP55066 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NcanP55066 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NcanP55066 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NcanP55066 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NcanP55066 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC12.39□□□□□ -0.43
NcanP55066 Gm15519-201ENSMUST00000120088 1566 ntBASIC12.39□□□□□ -0.43
NcanP55066 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NcanP55066 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
NcanP55066 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NcanP55066 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.38□□□□□ -0.43
NcanP55066 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.38□□□□□ -0.43
NcanP55066 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NcanP55066 Gm14005-210ENSMUST00000225087 1413 ntBASIC12.38□□□□□ -0.43
NcanP55066 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.38□□□□□ -0.43
NcanP55066 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
NcanP55066 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.38□□□□□ -0.43
NcanP55066 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NcanP55066 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NcanP55066 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NcanP55066 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NcanP55066 Gm4294-201ENSMUST00000105169 614 ntBASIC12.38□□□□□ -0.43
NcanP55066 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NcanP55066 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NcanP55066 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC12.38□□□□□ -0.43
NcanP55066 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
NcanP55066 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NcanP55066 Gm23694-201ENSMUST00000179335 110 ntBASIC12.38□□□□□ -0.43
NcanP55066 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.38□□□□□ -0.43
NcanP55066 Mir7051-201ENSMUST00000184167 73 ntBASIC12.38□□□□□ -0.43
NcanP55066 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC12.38□□□□□ -0.43
NcanP55066 Gm18035-201ENSMUST00000211962 589 ntBASIC12.38□□□□□ -0.43
NcanP55066 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NcanP55066 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC12.38□□□□□ -0.43
NcanP55066 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
NcanP55066 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NcanP55066 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
NcanP55066 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
NcanP55066 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NcanP55066 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
NcanP55066 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NcanP55066 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NcanP55066 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
NcanP55066 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NcanP55066 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.38□□□□□ -0.43
NcanP55066 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NcanP55066 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NcanP55066 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
NcanP55066 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms