Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Fdft1P53798 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.81□□□□□ -0.52
Fdft1P53798 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Fdft1P53798 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.81□□□□□ -0.52
Fdft1P53798 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Fdft1P53798 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.81□□□□□ -0.52
Fdft1P53798 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.81□□□□□ -0.52
Fdft1P53798 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Fdft1P53798 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fdft1P53798 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fdft1P53798 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fdft1P53798 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fdft1P53798 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Fdft1P53798 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fdft1P53798 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.8□□□□□ -0.52
Fdft1P53798 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.8□□□□□ -0.52
Fdft1P53798 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fdft1P53798 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fdft1P53798 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fdft1P53798 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Fdft1P53798 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fdft1P53798 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.8□□□□□ -0.52
Fdft1P53798 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fdft1P53798 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.8□□□□□ -0.52
Fdft1P53798 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fdft1P53798 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Fdft1P53798 Gm15198-201ENSMUST00000117283 177 ntBASIC11.8□□□□□ -0.52
Fdft1P53798 Gm14723-201ENSMUST00000118686 215 ntBASIC11.8□□□□□ -0.52
Fdft1P53798 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.8□□□□□ -0.52
Fdft1P53798 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Fdft1P53798 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Fdft1P53798 Mir1938-201ENSMUST00000158746 100 ntBASIC11.8□□□□□ -0.52
Fdft1P53798 Gm9136-201ENSMUST00000193368 454 ntBASIC11.8□□□□□ -0.52
Fdft1P53798 Gm43758-201ENSMUST00000199500 367 ntBASIC11.8□□□□□ -0.52
Fdft1P53798 Gm3961-201ENSMUST00000204425 994 ntBASIC11.8□□□□□ -0.52
Fdft1P53798 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.8□□□□□ -0.52
Fdft1P53798 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.8□□□□□ -0.52
Fdft1P53798 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.8□□□□□ -0.52
Fdft1P53798 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fdft1P53798 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.8□□□□□ -0.52
Fdft1P53798 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fdft1P53798 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.8□□□□□ -0.52
Fdft1P53798 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fdft1P53798 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.8□□□□□ -0.52
Fdft1P53798 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Fdft1P53798 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fdft1P53798 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Fdft1P53798 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.8□□□□□ -0.52
Fdft1P53798 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.8□□□□□ -0.52
Fdft1P53798 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.8□□□□□ -0.52
Fdft1P53798 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fdft1P53798 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fdft1P53798 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fdft1P53798 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Fdft1P53798 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Fdft1P53798 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.8□□□□□ -0.52
Fdft1P53798 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Fdft1P53798 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Fdft1P53798 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fdft1P53798 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fdft1P53798 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Fdft1P53798 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fdft1P53798 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fdft1P53798 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fdft1P53798 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.79□□□□□ -0.52
Fdft1P53798 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fdft1P53798 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Fdft1P53798 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fdft1P53798 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Fdft1P53798 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fdft1P53798 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.79□□□□□ -0.52
Fdft1P53798 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.79□□□□□ -0.52
Fdft1P53798 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Fdft1P53798 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fdft1P53798 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fdft1P53798 Gm24255-201ENSMUST00000104481 128 ntBASIC11.79□□□□□ -0.52
Fdft1P53798 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Fdft1P53798 Gm14381-201ENSMUST00000122105 414 ntBASIC11.79□□□□□ -0.52
Fdft1P53798 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.79□□□□□ -0.52
Fdft1P53798 Gm8885-201ENSMUST00000189382 598 ntBASIC11.79□□□□□ -0.52
Fdft1P53798 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.79□□□□□ -0.52
Fdft1P53798 Gm43179-201ENSMUST00000198797 275 ntBASIC11.79□□□□□ -0.52
Fdft1P53798 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.79□□□□□ -0.52
Fdft1P53798 Gm19187-201ENSMUST00000206781 892 ntBASIC11.79□□□□□ -0.52
Fdft1P53798 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Fdft1P53798 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fdft1P53798 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fdft1P53798 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms