Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox3P53784 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.35□□□□□ -0.59
Sox3P53784 Gm13600-201ENSMUST00000117949 744 ntBASIC11.35□□□□□ -0.59
Sox3P53784 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox3P53784 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox3P53784 Mir6998-201ENSMUST00000183343 64 ntBASIC11.35□□□□□ -0.59
Sox3P53784 Mir7076-201ENSMUST00000183519 74 ntBASIC11.35□□□□□ -0.59
Sox3P53784 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.35□□□□□ -0.59
Sox3P53784 Gm7902-201ENSMUST00000198842 947 ntBASIC11.35□□□□□ -0.59
Sox3P53784 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Sox3P53784 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.35□□□□□ -0.59
Sox3P53784 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.35□□□□□ -0.59
Sox3P53784 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox3P53784 Arhgef33-207ENSMUST00000224966 490 ntBASIC11.35□□□□□ -0.59
Sox3P53784 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Sox3P53784 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.35□□□□□ -0.59
Sox3P53784 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox3P53784 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox3P53784 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox3P53784 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox3P53784 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox3P53784 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox3P53784 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox3P53784 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox3P53784 Cog3-203ENSMUST00000227473 4197 ntBASIC11.35□□□□□ -0.59
Sox3P53784 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox3P53784 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox3P53784 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox3P53784 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
Sox3P53784 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox3P53784 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox3P53784 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC11.35□□□□□ -0.59
Sox3P53784 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.35□□□□□ -0.59
Sox3P53784 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sox3P53784 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sox3P53784 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.34□□□□□ -0.59
Sox3P53784 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Gm12899-201ENSMUST00000120565 551 ntBASIC11.34□□□□□ -0.59
Sox3P53784 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.34□□□□□ -0.59
Sox3P53784 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sox3P53784 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.34□□□□□ -0.59
Sox3P53784 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sox3P53784 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.34□□□□□ -0.59
Sox3P53784 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Gm5733-201ENSMUST00000190232 939 ntBASIC11.34□□□□□ -0.59
Sox3P53784 Mir7686-201ENSMUST00000200604 57 ntBASIC11.34□□□□□ -0.59
Sox3P53784 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.34□□□□□ -0.59
Sox3P53784 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sox3P53784 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Sox3P53784 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.34□□□□□ -0.59
Sox3P53784 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Sox3P53784 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.34□□□□□ -0.59
Sox3P53784 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.34□□□□□ -0.59
Sox3P53784 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.34□□□□□ -0.59
Sox3P53784 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sox3P53784 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox3P53784 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Sox3P53784 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Sox3P53784 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Sox3P53784 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Sox3P53784 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Sox3P53784 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms