Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Gm45331-201ENSMUST00000209868 554 ntBASIC12.1□□□□□ -0.47
ClgnP52194 Gm13097-201ENSMUST00000210722 397 ntBASIC12.1□□□□□ -0.47
ClgnP52194 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.1□□□□□ -0.47
ClgnP52194 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.1□□□□□ -0.47
ClgnP52194 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.1□□□□□ -0.47
ClgnP52194 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.1□□□□□ -0.47
ClgnP52194 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
ClgnP52194 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.1□□□□□ -0.47
ClgnP52194 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
ClgnP52194 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClgnP52194 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
ClgnP52194 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
ClgnP52194 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
ClgnP52194 Gm15198-201ENSMUST00000117283 177 ntBASIC12.09□□□□□ -0.47
ClgnP52194 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 Gm38341-201ENSMUST00000195357 515 ntBASIC12.09□□□□□ -0.47
ClgnP52194 Gm43179-201ENSMUST00000198797 275 ntBASIC12.09□□□□□ -0.47
ClgnP52194 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.09□□□□□ -0.47
ClgnP52194 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
ClgnP52194 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 Gm45501-201ENSMUST00000211468 2526 ntBASIC12.09□□□□□ -0.47
ClgnP52194 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
ClgnP52194 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
ClgnP52194 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
ClgnP52194 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClgnP52194 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
ClgnP52194 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
ClgnP52194 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
ClgnP52194 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
ClgnP52194 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
ClgnP52194 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClgnP52194 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClgnP52194 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.08□□□□□ -0.48
ClgnP52194 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClgnP52194 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ClgnP52194 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClgnP52194 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClgnP52194 Gm23270-201ENSMUST00000104055 131 ntBASIC12.08□□□□□ -0.48
ClgnP52194 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
ClgnP52194 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
ClgnP52194 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
ClgnP52194 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
ClgnP52194 Gm14247-201ENSMUST00000120950 237 ntBASIC12.08□□□□□ -0.48
ClgnP52194 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.08□□□□□ -0.48
ClgnP52194 Rprl1-201ENSMUST00000158050 327 ntBASIC12.08□□□□□ -0.48
ClgnP52194 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
ClgnP52194 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.08□□□□□ -0.48
ClgnP52194 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.08□□□□□ -0.48
ClgnP52194 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
ClgnP52194 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.08□□□□□ -0.48
ClgnP52194 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.08□□□□□ -0.48
ClgnP52194 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClgnP52194 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
ClgnP52194 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms