Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
LtbrP50284 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.01□□□□□ -0.17
LtbrP50284 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LtbrP50284 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LtbrP50284 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LtbrP50284 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LtbrP50284 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.01□□□□□ -0.17
LtbrP50284 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LtbrP50284 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LtbrP50284 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC14.01□□□□□ -0.17
LtbrP50284 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LtbrP50284 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC14.01□□□□□ -0.17
LtbrP50284 Gm11422-201ENSMUST00000118925 1103 ntBASIC14.01□□□□□ -0.17
LtbrP50284 Gm7722-201ENSMUST00000120646 741 ntBASIC14.01□□□□□ -0.17
LtbrP50284 Gm11836-201ENSMUST00000121022 441 ntBASIC14.01□□□□□ -0.17
LtbrP50284 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LtbrP50284 Gm24398-201ENSMUST00000157870 109 ntBASIC14.01□□□□□ -0.17
LtbrP50284 Gm29011-201ENSMUST00000191059 712 ntBASIC14.01□□□□□ -0.17
LtbrP50284 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LtbrP50284 Gm44958-201ENSMUST00000203734 736 ntBASIC14.01□□□□□ -0.17
LtbrP50284 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC14.01□□□□□ -0.17
LtbrP50284 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC14.01□□□□□ -0.17
LtbrP50284 AC122350.1-201ENSMUST00000228135 533 ntBASIC14.01□□□□□ -0.17
LtbrP50284 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LtbrP50284 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LtbrP50284 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LtbrP50284 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LtbrP50284 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC14.01□□□□□ -0.17
LtbrP50284 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LtbrP50284 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.01□□□□□ -0.17
LtbrP50284 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LtbrP50284 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LtbrP50284 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LtbrP50284 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LtbrP50284 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.01□□□□□ -0.17
LtbrP50284 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LtbrP50284 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LtbrP50284 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LtbrP50284 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LtbrP50284 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LtbrP50284 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
LtbrP50284 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14□□□□□ -0.17
LtbrP50284 Gm8038-201ENSMUST00000164674 2044 ntBASIC14□□□□□ -0.17
LtbrP50284 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14□□□□□ -0.17
LtbrP50284 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LtbrP50284 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LtbrP50284 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LtbrP50284 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14□□□□□ -0.17
LtbrP50284 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LtbrP50284 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LtbrP50284 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LtbrP50284 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LtbrP50284 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LtbrP50284 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC14□□□□□ -0.17
LtbrP50284 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC14□□□□□ -0.17
LtbrP50284 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LtbrP50284 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC14□□□□□ -0.17
LtbrP50284 Gm11511-201ENSMUST00000118146 540 ntBASIC14□□□□□ -0.17
LtbrP50284 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14□□□□□ -0.17
LtbrP50284 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LtbrP50284 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC14□□□□□ -0.17
LtbrP50284 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC14□□□□□ -0.17
LtbrP50284 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC14□□□□□ -0.17
LtbrP50284 Gm17983-201ENSMUST00000190766 594 ntBASIC14□□□□□ -0.17
LtbrP50284 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC14□□□□□ -0.17
LtbrP50284 Gm38228-201ENSMUST00000193169 1293 ntBASIC14□□□□□ -0.17
LtbrP50284 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC14□□□□□ -0.17
LtbrP50284 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LtbrP50284 Gm18460-201ENSMUST00000208088 464 ntBASIC14□□□□□ -0.17
LtbrP50284 Gm44554-201ENSMUST00000208738 147 ntBASIC14□□□□□ -0.17
LtbrP50284 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC14□□□□□ -0.17
LtbrP50284 CT010480.1-201ENSMUST00000223612 363 ntBASIC14□□□□□ -0.17
LtbrP50284 AC136376.2-201ENSMUST00000228819 490 ntBASIC14□□□□□ -0.17
LtbrP50284 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LtbrP50284 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14□□□□□ -0.17
LtbrP50284 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LtbrP50284 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC14□□□□□ -0.17
LtbrP50284 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14□□□□□ -0.17
LtbrP50284 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LtbrP50284 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14□□□□□ -0.17
LtbrP50284 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LtbrP50284 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LtbrP50284 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LtbrP50284 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14□□□□□ -0.17
LtbrP50284 Gm37472-201ENSMUST00000192342 4052 ntBASIC14□□□□□ -0.17
LtbrP50284 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LtbrP50284 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LtbrP50284 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LtbrP50284 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LtbrP50284 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LtbrP50284 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
LtbrP50284 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LtbrP50284 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LtbrP50284 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LtbrP50284 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LtbrP50284 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LtbrP50284 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.99□□□□□ -0.17
LtbrP50284 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LtbrP50284 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LtbrP50284 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms