Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LmnaP48678 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
LmnaP48678 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LmnaP48678 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.42□□□□□ -0.42
LmnaP48678 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
LmnaP48678 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.42□□□□□ -0.42
LmnaP48678 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LmnaP48678 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LmnaP48678 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
LmnaP48678 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LmnaP48678 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
LmnaP48678 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LmnaP48678 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LmnaP48678 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.41□□□□□ -0.42
LmnaP48678 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LmnaP48678 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LmnaP48678 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LmnaP48678 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LmnaP48678 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LmnaP48678 Gm13035-201ENSMUST00000117496 342 ntBASIC12.41□□□□□ -0.42
LmnaP48678 Gm12467-201ENSMUST00000117625 745 ntBASIC12.41□□□□□ -0.42
LmnaP48678 Gm13736-201ENSMUST00000119272 253 ntBASIC12.41□□□□□ -0.42
LmnaP48678 Gm11941-201ENSMUST00000119904 610 ntBASIC12.41□□□□□ -0.42
LmnaP48678 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LmnaP48678 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LmnaP48678 Gm3344-201ENSMUST00000169610 603 ntBASIC12.41□□□□□ -0.42
LmnaP48678 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LmnaP48678 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.41□□□□□ -0.42
LmnaP48678 Gm23153-201ENSMUST00000175323 313 ntBASIC12.41□□□□□ -0.42
LmnaP48678 Gm37017-201ENSMUST00000195266 747 ntBASIC12.41□□□□□ -0.42
LmnaP48678 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.41□□□□□ -0.42
LmnaP48678 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LmnaP48678 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.41□□□□□ -0.42
LmnaP48678 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.41□□□□□ -0.42
LmnaP48678 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.41□□□□□ -0.42
LmnaP48678 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC12.41□□□□□ -0.42
LmnaP48678 AC140209.1-201ENSMUST00000227875 284 ntBASIC12.41□□□□□ -0.42
LmnaP48678 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LmnaP48678 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LmnaP48678 Gm25517-201ENSMUST00000083865 134 ntBASIC12.41□□□□□ -0.42
LmnaP48678 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LmnaP48678 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.41□□□□□ -0.42
LmnaP48678 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LmnaP48678 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LmnaP48678 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
LmnaP48678 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LmnaP48678 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LmnaP48678 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LmnaP48678 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LmnaP48678 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LmnaP48678 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.41□□□□□ -0.42
LmnaP48678 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LmnaP48678 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LmnaP48678 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LmnaP48678 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LmnaP48678 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.4□□□□□ -0.42
LmnaP48678 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
LmnaP48678 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.4□□□□□ -0.42
LmnaP48678 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
LmnaP48678 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
LmnaP48678 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.4□□□□□ -0.42
LmnaP48678 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.4□□□□□ -0.42
LmnaP48678 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.4□□□□□ -0.42
LmnaP48678 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
LmnaP48678 Gm25025-201ENSMUST00000175018 111 ntBASIC12.4□□□□□ -0.42
LmnaP48678 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.4□□□□□ -0.42
LmnaP48678 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC12.4□□□□□ -0.42
LmnaP48678 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
LmnaP48678 Gm1821-202ENSMUST00000227415 750 ntBASIC12.4□□□□□ -0.42
LmnaP48678 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.4□□□□□ -0.42
LmnaP48678 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
LmnaP48678 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.4□□□□□ -0.42
LmnaP48678 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LmnaP48678 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms