Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx1P48377 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx1P48377 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.07□□□□□ -0.16
Rfx1P48377 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx1P48377 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC14.07□□□□□ -0.16
Rfx1P48377 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx1P48377 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Rfx1P48377 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx1P48377 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rfx1P48377 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Rfx1P48377 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx1P48377 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.06□□□□□ -0.16
Rfx1P48377 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx1P48377 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx1P48377 AC167022.1-201ENSMUST00000218647 1458 ntBASIC14.06□□□□□ -0.16
Rfx1P48377 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Rfx1P48377 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx1P48377 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx1P48377 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx1P48377 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx1P48377 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx1P48377 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rfx1P48377 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rfx1P48377 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC14.06□□□□□ -0.16
Rfx1P48377 Gm25116-201ENSMUST00000157191 122 ntBASIC14.06□□□□□ -0.16
Rfx1P48377 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx1P48377 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
Rfx1P48377 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.06□□□□□ -0.16
Rfx1P48377 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx1P48377 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.06□□□□□ -0.16
Rfx1P48377 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx1P48377 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx1P48377 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx1P48377 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx1P48377 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx1P48377 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx1P48377 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx1P48377 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Rfx1P48377 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx1P48377 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx1P48377 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx1P48377 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx1P48377 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx1P48377 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx1P48377 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rfx1P48377 AC122291.1-201ENSMUST00000228937 5748 ntBASIC14.06□□□□□ -0.16
Rfx1P48377 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx1P48377 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx1P48377 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx1P48377 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx1P48377 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx1P48377 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx1P48377 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx1P48377 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rfx1P48377 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.05□□□□□ -0.16
Rfx1P48377 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.05□□□□□ -0.16
Rfx1P48377 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.05□□□□□ -0.16
Rfx1P48377 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.05□□□□□ -0.16
Rfx1P48377 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.05□□□□□ -0.16
Rfx1P48377 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx1P48377 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.05□□□□□ -0.16
Rfx1P48377 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Rfx1P48377 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx1P48377 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx1P48377 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Rfx1P48377 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rfx1P48377 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx1P48377 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rfx1P48377 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.05□□□□□ -0.16
Rfx1P48377 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx1P48377 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx1P48377 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx1P48377 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Rfx1P48377 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx1P48377 AC165351.1-201ENSMUST00000219078 2020 ntBASIC14.05□□□□□ -0.16
Rfx1P48377 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx1P48377 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx1P48377 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx1P48377 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx1P48377 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rfx1P48377 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC14.05□□□□□ -0.16
Rfx1P48377 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx1P48377 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx1P48377 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx1P48377 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx1P48377 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx1P48377 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx1P48377 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx1P48377 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx1P48377 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx1P48377 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Rfx1P48377 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx1P48377 Gm5419-201ENSMUST00000119301 527 ntBASIC14.04□□□□□ -0.16
Rfx1P48377 Gm11700-201ENSMUST00000119409 403 ntBASIC14.04□□□□□ -0.16
Rfx1P48377 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfx1P48377 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Rfx1P48377 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.04□□□□□ -0.16
Rfx1P48377 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.04□□□□□ -0.16
Rfx1P48377 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rfx1P48377 Gm27731-201ENSMUST00000185192 107 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms