Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-2P42586 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.8□□□□□ -0.68
Nkx2-2P42586 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Nkx2-2P42586 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Nkx2-2P42586 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.79□□□□□ -0.68
Nkx2-2P42586 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Gm8100-201ENSMUST00000182906 988 ntBASIC10.79□□□□□ -0.68
Nkx2-2P42586 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.79□□□□□ -0.68
Nkx2-2P42586 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Lect2-202ENSMUST00000225183 823 ntBASIC10.79□□□□□ -0.68
Nkx2-2P42586 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx2-2P42586 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Nkx2-2P42586 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.78□□□□□ -0.68
Nkx2-2P42586 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-2P42586 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Gm14028-201ENSMUST00000117434 479 ntBASIC10.78□□□□□ -0.68
Nkx2-2P42586 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Gm14277-201ENSMUST00000121195 360 ntBASIC10.78□□□□□ -0.68
Nkx2-2P42586 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Nkx2-2P42586 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-2P42586 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.78□□□□□ -0.68
Nkx2-2P42586 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.78□□□□□ -0.68
Nkx2-2P42586 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Gm45575-201ENSMUST00000210283 548 ntBASIC10.78□□□□□ -0.68
Nkx2-2P42586 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.78□□□□□ -0.68
Nkx2-2P42586 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Gm21811-201ENSMUST00000096485 930 ntBASIC10.78□□□□□ -0.68
Nkx2-2P42586 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Nkx2-2P42586 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Nkx2-2P42586 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms