Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.1□□□□□ -0.63
Sox6P40645 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sox6P40645 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.1□□□□□ -0.63
Sox6P40645 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.1□□□□□ -0.63
Sox6P40645 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.1□□□□□ -0.63
Sox6P40645 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Sox6P40645 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Sox6P40645 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.1□□□□□ -0.63
Sox6P40645 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Sox6P40645 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sox6P40645 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox6P40645 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.09□□□□□ -0.63
Sox6P40645 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.09□□□□□ -0.63
Sox6P40645 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.09□□□□□ -0.63
Sox6P40645 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.09□□□□□ -0.63
Sox6P40645 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sox6P40645 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Sox6P40645 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Sox6P40645 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Sox6P40645 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.09□□□□□ -0.63
Sox6P40645 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Sox6P40645 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.09□□□□□ -0.63
Sox6P40645 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.09□□□□□ -0.63
Sox6P40645 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.09□□□□□ -0.63
Sox6P40645 Mir8109-201ENSMUST00000184375 117 ntBASIC11.09□□□□□ -0.63
Sox6P40645 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.09□□□□□ -0.63
Sox6P40645 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.09□□□□□ -0.63
Sox6P40645 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sox6P40645 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Sox6P40645 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sox6P40645 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox6P40645 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.09□□□□□ -0.63
Sox6P40645 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox6P40645 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox6P40645 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox6P40645 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox6P40645 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox6P40645 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox6P40645 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox6P40645 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.08□□□□□ -0.64
Sox6P40645 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox6P40645 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox6P40645 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox6P40645 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox6P40645 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sox6P40645 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox6P40645 Gm14723-201ENSMUST00000118686 215 ntBASIC11.08□□□□□ -0.64
Sox6P40645 Gm9083-201ENSMUST00000120423 819 ntBASIC11.08□□□□□ -0.64
Sox6P40645 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox6P40645 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Sox6P40645 Gm28882-201ENSMUST00000185504 314 ntBASIC11.08□□□□□ -0.64
Sox6P40645 Gm31256-201ENSMUST00000194705 506 ntBASIC11.08□□□□□ -0.64
Sox6P40645 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox6P40645 Gm45865-201ENSMUST00000211815 945 ntBASIC11.08□□□□□ -0.64
Sox6P40645 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox6P40645 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox6P40645 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sox6P40645 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox6P40645 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms