Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl12P40224 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl12P40224 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl12P40224 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl12P40224 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cxcl12P40224 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cxcl12P40224 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cxcl12P40224 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cxcl12P40224 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.11□□□□□ -0.47
Cxcl12P40224 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
Cxcl12P40224 Mir744-201ENSMUST00000103261 100 ntBASIC12.11□□□□□ -0.47
Cxcl12P40224 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Gm13204-201ENSMUST00000120110 821 ntBASIC12.11□□□□□ -0.47
Cxcl12P40224 Gm15197-201ENSMUST00000120526 478 ntBASIC12.11□□□□□ -0.47
Cxcl12P40224 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.11□□□□□ -0.47
Cxcl12P40224 Gm26272-201ENSMUST00000179241 132 ntBASIC12.11□□□□□ -0.47
Cxcl12P40224 Gm7069-201ENSMUST00000182418 1008 ntBASIC12.11□□□□□ -0.47
Cxcl12P40224 Gm37284-201ENSMUST00000193607 539 ntBASIC12.11□□□□□ -0.47
Cxcl12P40224 Gm5982-201ENSMUST00000196234 512 ntBASIC12.11□□□□□ -0.47
Cxcl12P40224 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.11□□□□□ -0.47
Cxcl12P40224 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.11□□□□□ -0.47
Cxcl12P40224 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cxcl12P40224 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Cxcl12P40224 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.11□□□□□ -0.47
Cxcl12P40224 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cxcl12P40224 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cxcl12P40224 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cxcl12P40224 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Cxcl12P40224 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.1□□□□□ -0.47
Cxcl12P40224 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Cxcl12P40224 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.1□□□□□ -0.47
Cxcl12P40224 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.1□□□□□ -0.47
Cxcl12P40224 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Cxcl12P40224 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cxcl12P40224 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cxcl12P40224 Gm15196-201ENSMUST00000121406 482 ntBASIC12.1□□□□□ -0.47
Cxcl12P40224 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC12.1□□□□□ -0.47
Cxcl12P40224 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.1□□□□□ -0.47
Cxcl12P40224 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC12.1□□□□□ -0.47
Cxcl12P40224 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Gm17825-201ENSMUST00000206836 794 ntBASIC12.1□□□□□ -0.47
Cxcl12P40224 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC12.1□□□□□ -0.47
Cxcl12P40224 AC162932.1-201ENSMUST00000219209 872 ntBASIC12.1□□□□□ -0.47
Cxcl12P40224 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cxcl12P40224 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.1□□□□□ -0.47
Cxcl12P40224 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cxcl12P40224 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms