Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1P40201 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1P40201 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1P40201 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1P40201 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1P40201 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1P40201 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1P40201 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1P40201 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1P40201 Gm15258-201ENSMUST00000153801 741 ntBASIC17.3■□□□□ 0.36
Chd1P40201 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1P40201 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Chd1P40201 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1P40201 Gm38145-201ENSMUST00000192319 693 ntBASIC17.3■□□□□ 0.36
Chd1P40201 Gm42908-201ENSMUST00000197508 870 ntBASIC17.3■□□□□ 0.36
Chd1P40201 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Chd1P40201 Gm44540-201ENSMUST00000205640 354 ntBASIC17.3■□□□□ 0.36
Chd1P40201 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1P40201 Gm18391-201ENSMUST00000217189 658 ntBASIC17.3■□□□□ 0.36
Chd1P40201 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1P40201 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1P40201 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chd1P40201 Gm7701-201ENSMUST00000163185 1479 ntBASIC17.3■□□□□ 0.36
Chd1P40201 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC17.3■□□□□ 0.36
Chd1P40201 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1P40201 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1P40201 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1P40201 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1P40201 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1P40201 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1P40201 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1P40201 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1P40201 Gm42928-201ENSMUST00000197338 3339 ntBASIC17.29■□□□□ 0.36
Chd1P40201 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1P40201 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1P40201 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1P40201 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1P40201 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1P40201 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1P40201 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1P40201 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1P40201 Mir1190-201ENSMUST00000116925 96 ntBASIC17.29■□□□□ 0.36
Chd1P40201 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC17.29■□□□□ 0.36
Chd1P40201 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1P40201 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Chd1P40201 Gm6677-201ENSMUST00000195100 441 ntBASIC17.29■□□□□ 0.36
Chd1P40201 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC17.29■□□□□ 0.36
Chd1P40201 Gm6859-201ENSMUST00000218614 989 ntBASIC17.29■□□□□ 0.36
Chd1P40201 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Chd1P40201 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1P40201 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1P40201 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1P40201 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Chd1P40201 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chd1P40201 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1P40201 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1P40201 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Chd1P40201 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Chd1P40201 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1P40201 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Chd1P40201 Mir8091-201ENSMUST00000183602 139 ntBASIC17.28■□□□□ 0.36
Chd1P40201 Gm44236-201ENSMUST00000204492 513 ntBASIC17.28■□□□□ 0.36
Chd1P40201 AC133496.1-201ENSMUST00000223891 743 ntBASIC17.28■□□□□ 0.36
Chd1P40201 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1P40201 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1P40201 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1P40201 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1P40201 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1P40201 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Chd1P40201 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Chd1P40201 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1P40201 CT010447.1-201ENSMUST00000225657 1608 ntBASIC17.28■□□□□ 0.36
Chd1P40201 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1P40201 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Chd1P40201 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd1P40201 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1P40201 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1P40201 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1P40201 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1P40201 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1P40201 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1P40201 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1P40201 Gm8876-201ENSMUST00000120768 1122 ntBASIC17.27■□□□□ 0.36
Chd1P40201 Gm14633-201ENSMUST00000121152 470 ntBASIC17.27■□□□□ 0.36
Chd1P40201 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Chd1P40201 Gm18164-201ENSMUST00000213769 927 ntBASIC17.27■□□□□ 0.36
Chd1P40201 Gm18166-201ENSMUST00000215557 927 ntBASIC17.27■□□□□ 0.36
Chd1P40201 AC164614.1-201ENSMUST00000216038 397 ntBASIC17.27■□□□□ 0.36
Chd1P40201 Gm8618-201ENSMUST00000097570 432 ntBASIC17.27■□□□□ 0.36
Chd1P40201 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1P40201 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1P40201 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1P40201 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1P40201 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1P40201 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1P40201 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1P40201 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Chd1P40201 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1P40201 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.27■□□□□ 0.36
Chd1P40201 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms