Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Upk2P38575 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.34□□□□□ -0.75
Upk2P38575 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Upk2P38575 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Upk2P38575 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.33□□□□□ -0.76
Upk2P38575 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.33□□□□□ -0.76
Upk2P38575 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Upk2P38575 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Upk2P38575 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Upk2P38575 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.33□□□□□ -0.76
Upk2P38575 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.33□□□□□ -0.76
Upk2P38575 Gm4310-201ENSMUST00000177847 889 ntBASIC10.33□□□□□ -0.76
Upk2P38575 Gm28937-201ENSMUST00000185413 695 ntBASIC10.33□□□□□ -0.76
Upk2P38575 Gm29400-201ENSMUST00000187208 695 ntBASIC10.33□□□□□ -0.76
Upk2P38575 Gm28662-201ENSMUST00000188446 695 ntBASIC10.33□□□□□ -0.76
Upk2P38575 Gm28251-201ENSMUST00000188835 695 ntBASIC10.33□□□□□ -0.76
Upk2P38575 Gm37318-201ENSMUST00000194325 695 ntBASIC10.33□□□□□ -0.76
Upk2P38575 Gm38017-201ENSMUST00000194768 695 ntBASIC10.33□□□□□ -0.76
Upk2P38575 Gm37287-201ENSMUST00000195449 695 ntBASIC10.33□□□□□ -0.76
Upk2P38575 Gm37793-201ENSMUST00000195548 695 ntBASIC10.33□□□□□ -0.76
Upk2P38575 Rps4l-202ENSMUST00000204242 789 ntBASIC10.33□□□□□ -0.76
Upk2P38575 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.33□□□□□ -0.76
Upk2P38575 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.33□□□□□ -0.76
Upk2P38575 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.33□□□□□ -0.76
Upk2P38575 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Upk2P38575 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk2P38575 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Upk2P38575 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.33□□□□□ -0.76
Upk2P38575 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.33□□□□□ -0.76
Upk2P38575 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Upk2P38575 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Upk2P38575 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Gm23949-201ENSMUST00000104027 127 ntBASIC10.32□□□□□ -0.76
Upk2P38575 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Upk2P38575 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Upk2P38575 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.32□□□□□ -0.76
Upk2P38575 Gm24749-201ENSMUST00000157838 343 ntBASIC10.32□□□□□ -0.76
Upk2P38575 Gm26083-201ENSMUST00000157904 193 ntBASIC10.32□□□□□ -0.76
Upk2P38575 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Upk2P38575 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Upk2P38575 Gm38117-201ENSMUST00000194653 939 ntBASIC10.32□□□□□ -0.76
Upk2P38575 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.32□□□□□ -0.76
Upk2P38575 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Upk2P38575 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
Upk2P38575 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.32□□□□□ -0.76
Upk2P38575 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.32□□□□□ -0.76
Upk2P38575 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms