Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sftpa1P35242 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Sftpa1P35242 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Sftpa1P35242 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Sftpa1P35242 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sftpa1P35242 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sftpa1P35242 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sftpa1P35242 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Sftpa1P35242 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sftpa1P35242 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sftpa1P35242 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC10.9□□□□□ -0.66
Sftpa1P35242 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.9□□□□□ -0.66
Sftpa1P35242 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sftpa1P35242 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sftpa1P35242 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.9□□□□□ -0.66
Sftpa1P35242 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.9□□□□□ -0.66
Sftpa1P35242 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sftpa1P35242 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sftpa1P35242 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Sftpa1P35242 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sftpa1P35242 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC10.9□□□□□ -0.66
Sftpa1P35242 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sftpa1P35242 Gm15615-201ENSMUST00000118876 198 ntBASIC10.9□□□□□ -0.66
Sftpa1P35242 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Sftpa1P35242 Gm42816-201ENSMUST00000198433 325 ntBASIC10.9□□□□□ -0.66
Sftpa1P35242 Gm43610-201ENSMUST00000199117 365 ntBASIC10.9□□□□□ -0.66
Sftpa1P35242 Gm6450-201ENSMUST00000200896 574 ntBASIC10.9□□□□□ -0.66
Sftpa1P35242 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sftpa1P35242 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sftpa1P35242 AC114645.1-201ENSMUST00000215831 187 ntBASIC10.9□□□□□ -0.66
Sftpa1P35242 Gm7940-201ENSMUST00000218195 769 ntBASIC10.9□□□□□ -0.66
Sftpa1P35242 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sftpa1P35242 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Sftpa1P35242 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.9□□□□□ -0.66
Sftpa1P35242 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.9□□□□□ -0.66
Sftpa1P35242 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sftpa1P35242 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sftpa1P35242 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sftpa1P35242 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sftpa1P35242 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sftpa1P35242 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sftpa1P35242 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.9□□□□□ -0.66
Sftpa1P35242 Gm44056-201ENSMUST00000204623 1427 ntBASIC10.9□□□□□ -0.66
Sftpa1P35242 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sftpa1P35242 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sftpa1P35242 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sftpa1P35242 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sftpa1P35242 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sftpa1P35242 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Sftpa1P35242 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sftpa1P35242 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Sftpa1P35242 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Sftpa1P35242 Gm17213-201ENSMUST00000165161 1360 ntBASIC10.9□□□□□ -0.67
Sftpa1P35242 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Sftpa1P35242 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Sftpa1P35242 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sftpa1P35242 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Sftpa1P35242 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sftpa1P35242 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sftpa1P35242 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sftpa1P35242 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sftpa1P35242 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sftpa1P35242 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sftpa1P35242 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sftpa1P35242 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sftpa1P35242 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sftpa1P35242 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Sftpa1P35242 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sftpa1P35242 Gm24791-201ENSMUST00000104284 131 ntBASIC10.89□□□□□ -0.67
Sftpa1P35242 Gm14892-201ENSMUST00000117636 267 ntBASIC10.89□□□□□ -0.67
Sftpa1P35242 Gm13351-201ENSMUST00000118087 414 ntBASIC10.89□□□□□ -0.67
Sftpa1P35242 Gm11979-201ENSMUST00000119629 743 ntBASIC10.89□□□□□ -0.67
Sftpa1P35242 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sftpa1P35242 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sftpa1P35242 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sftpa1P35242 Gm22146-201ENSMUST00000157397 288 ntBASIC10.89□□□□□ -0.67
Sftpa1P35242 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC10.89□□□□□ -0.67
Sftpa1P35242 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.89□□□□□ -0.67
Sftpa1P35242 AC238811.4-201ENSMUST00000178019 1246 ntBASIC10.89□□□□□ -0.67
Sftpa1P35242 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC10.89□□□□□ -0.67
Sftpa1P35242 AC238940.3-201ENSMUST00000178830 1246 ntBASIC10.89□□□□□ -0.67
Sftpa1P35242 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sftpa1P35242 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.89□□□□□ -0.67
Sftpa1P35242 Gm44647-201ENSMUST00000207402 428 ntBASIC10.89□□□□□ -0.67
Sftpa1P35242 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Sftpa1P35242 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.89□□□□□ -0.67
Sftpa1P35242 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.89□□□□□ -0.67
Sftpa1P35242 Gm18499-201ENSMUST00000220808 1021 ntBASIC10.89□□□□□ -0.67
Sftpa1P35242 AC154361.2-201ENSMUST00000224747 943 ntBASIC10.89□□□□□ -0.67
Sftpa1P35242 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sftpa1P35242 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sftpa1P35242 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Sftpa1P35242 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sftpa1P35242 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sftpa1P35242 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sftpa1P35242 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sftpa1P35242 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sftpa1P35242 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.89□□□□□ -0.67
Sftpa1P35242 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.89□□□□□ -0.67
Sftpa1P35242 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms