Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp13P33435 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp13P33435 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp13P33435 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp13P33435 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.07□□□□□ -0.48
Mmp13P33435 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp13P33435 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Mmp13P33435 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.07□□□□□ -0.48
Mmp13P33435 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.07□□□□□ -0.48
Mmp13P33435 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp13P33435 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Mmp13P33435 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp13P33435 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp13P33435 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.07□□□□□ -0.48
Mmp13P33435 Gm24845-201ENSMUST00000158034 109 ntBASIC12.07□□□□□ -0.48
Mmp13P33435 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.07□□□□□ -0.48
Mmp13P33435 Gm38317-201ENSMUST00000195564 343 ntBASIC12.07□□□□□ -0.48
Mmp13P33435 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.07□□□□□ -0.48
Mmp13P33435 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp13P33435 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.07□□□□□ -0.48
Mmp13P33435 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.07□□□□□ -0.48
Mmp13P33435 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.07□□□□□ -0.48
Mmp13P33435 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.07□□□□□ -0.48
Mmp13P33435 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.07□□□□□ -0.48
Mmp13P33435 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Mmp13P33435 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp13P33435 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp13P33435 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp13P33435 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp13P33435 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.07□□□□□ -0.48
Mmp13P33435 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.07□□□□□ -0.48
Mmp13P33435 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp13P33435 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Mmp13P33435 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp13P33435 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.07□□□□□ -0.48
Mmp13P33435 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp13P33435 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.07□□□□□ -0.48
Mmp13P33435 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp13P33435 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp13P33435 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp13P33435 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.07□□□□□ -0.48
Mmp13P33435 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp13P33435 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Mmp13P33435 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.06□□□□□ -0.48
Mmp13P33435 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Mmp13P33435 Gm15610-201ENSMUST00000120584 195 ntBASIC12.06□□□□□ -0.48
Mmp13P33435 Gm13665-201ENSMUST00000120830 528 ntBASIC12.06□□□□□ -0.48
Mmp13P33435 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Mmp13P33435 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.06□□□□□ -0.48
Mmp13P33435 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.06□□□□□ -0.48
Mmp13P33435 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Gm18056-201ENSMUST00000207670 568 ntBASIC12.06□□□□□ -0.48
Mmp13P33435 Gm18061-201ENSMUST00000208350 562 ntBASIC12.06□□□□□ -0.48
Mmp13P33435 Gm18063-201ENSMUST00000208529 568 ntBASIC12.06□□□□□ -0.48
Mmp13P33435 Gm18052-201ENSMUST00000208750 559 ntBASIC12.06□□□□□ -0.48
Mmp13P33435 Gzmn-202ENSMUST00000225535 989 ntBASIC12.06□□□□□ -0.48
Mmp13P33435 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Mmp13P33435 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.06□□□□□ -0.48
Mmp13P33435 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Mmp13P33435 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.06□□□□□ -0.48
Mmp13P33435 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Mmp13P33435 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.06□□□□□ -0.48
Mmp13P33435 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp13P33435 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Mmp13P33435 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mmp13P33435 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.05□□□□□ -0.48
Mmp13P33435 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mmp13P33435 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mmp13P33435 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mmp13P33435 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Mmp13P33435 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Mmp13P33435 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.05□□□□□ -0.48
Mmp13P33435 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms