Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Hoxc11P31313 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Hoxc11P31313 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.48□□□□□ -0.57
Hoxc11P31313 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.48□□□□□ -0.57
Hoxc11P31313 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.48□□□□□ -0.57
Hoxc11P31313 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Hoxc11P31313 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Hoxc11P31313 Gm3508-201ENSMUST00000186012 792 ntBASIC11.48□□□□□ -0.57
Hoxc11P31313 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.48□□□□□ -0.57
Hoxc11P31313 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.48□□□□□ -0.57
Hoxc11P31313 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.48□□□□□ -0.57
Hoxc11P31313 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.48□□□□□ -0.57
Hoxc11P31313 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.48□□□□□ -0.57
Hoxc11P31313 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.48□□□□□ -0.57
Hoxc11P31313 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Hoxc11P31313 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC11.48□□□□□ -0.57
Hoxc11P31313 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Hoxc11P31313 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.48□□□□□ -0.57
Hoxc11P31313 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hoxc11P31313 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxc11P31313 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Hoxc11P31313 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Hoxc11P31313 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc11P31313 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc11P31313 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc11P31313 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Hoxc11P31313 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc11P31313 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc11P31313 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.47□□□□□ -0.57
Hoxc11P31313 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc11P31313 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc11P31313 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc11P31313 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc11P31313 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc11P31313 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.47□□□□□ -0.57
Hoxc11P31313 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc11P31313 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc11P31313 Gm11509-201ENSMUST00000117358 325 ntBASIC11.47□□□□□ -0.57
Hoxc11P31313 Gm12857-201ENSMUST00000117678 592 ntBASIC11.47□□□□□ -0.57
Hoxc11P31313 Gm8566-201ENSMUST00000120174 465 ntBASIC11.47□□□□□ -0.57
Hoxc11P31313 Gm14247-201ENSMUST00000120950 237 ntBASIC11.47□□□□□ -0.57
Hoxc11P31313 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.47□□□□□ -0.57
Hoxc11P31313 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.47□□□□□ -0.57
Hoxc11P31313 Gm7467-201ENSMUST00000185173 652 ntBASIC11.47□□□□□ -0.57
Hoxc11P31313 Gm5733-201ENSMUST00000190232 939 ntBASIC11.47□□□□□ -0.57
Hoxc11P31313 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.47□□□□□ -0.57
Hoxc11P31313 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc11P31313 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.47□□□□□ -0.57
Hoxc11P31313 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.47□□□□□ -0.57
Hoxc11P31313 AC154532.1-201ENSMUST00000227860 965 ntBASIC11.47□□□□□ -0.57
Hoxc11P31313 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Hoxc11P31313 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc11P31313 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc11P31313 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc11P31313 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.47□□□□□ -0.57
Hoxc11P31313 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Hoxc11P31313 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc11P31313 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc11P31313 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc11P31313 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc11P31313 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc11P31313 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hoxc11P31313 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxc11P31313 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.46□□□□□ -0.57
Hoxc11P31313 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.46□□□□□ -0.57
Hoxc11P31313 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxc11P31313 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxc11P31313 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxc11P31313 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.46□□□□□ -0.57
Hoxc11P31313 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxc11P31313 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hoxc11P31313 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.46□□□□□ -0.57
Hoxc11P31313 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Hoxc11P31313 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms