Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Nedd8P29595 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Nedd8P29595 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.84□□□□□ -0.67
Nedd8P29595 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nedd8P29595 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.84□□□□□ -0.67
Nedd8P29595 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.84□□□□□ -0.67
Nedd8P29595 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Nedd8P29595 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Nedd8P29595 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Nedd8P29595 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Nedd8P29595 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Nedd8P29595 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Nedd8P29595 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Nedd8P29595 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.83□□□□□ -0.68
Nedd8P29595 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.83□□□□□ -0.68
Nedd8P29595 Gm12341-201ENSMUST00000119724 503 ntBASIC10.83□□□□□ -0.68
Nedd8P29595 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC10.83□□□□□ -0.68
Nedd8P29595 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.83□□□□□ -0.68
Nedd8P29595 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC10.83□□□□□ -0.68
Nedd8P29595 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Nedd8P29595 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Nedd8P29595 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Gm24513-201ENSMUST00000174964 138 ntBASIC10.83□□□□□ -0.68
Nedd8P29595 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Nedd8P29595 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Nedd8P29595 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC10.83□□□□□ -0.68
Nedd8P29595 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC10.83□□□□□ -0.68
Nedd8P29595 Gm27397-201ENSMUST00000184997 107 ntBASIC10.83□□□□□ -0.68
Nedd8P29595 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC10.83□□□□□ -0.68
Nedd8P29595 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.83□□□□□ -0.68
Nedd8P29595 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.83□□□□□ -0.68
Nedd8P29595 AC151286.1-201ENSMUST00000198489 145 ntBASIC10.83□□□□□ -0.68
Nedd8P29595 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.83□□□□□ -0.68
Nedd8P29595 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.83□□□□□ -0.68
Nedd8P29595 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.83□□□□□ -0.68
Nedd8P29595 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.83□□□□□ -0.68
Nedd8P29595 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Nedd8P29595 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nedd8P29595 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Nedd8P29595 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Gm12799-201ENSMUST00000118151 2560 ntBASIC10.82□□□□□ -0.68
Nedd8P29595 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Nedd8P29595 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.82□□□□□ -0.68
Nedd8P29595 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Nedd8P29595 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Nedd8P29595 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.82□□□□□ -0.68
Nedd8P29595 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.82□□□□□ -0.68
Nedd8P29595 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.82□□□□□ -0.68
Nedd8P29595 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC10.82□□□□□ -0.68
Nedd8P29595 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.82□□□□□ -0.68
Nedd8P29595 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.82□□□□□ -0.68
Nedd8P29595 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.82□□□□□ -0.68
Nedd8P29595 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.82□□□□□ -0.68
Nedd8P29595 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nedd8P29595 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms