Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcam1P29533 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.51□□□□□ -0.25
Vcam1P29533 Gm8899-201ENSMUST00000214635 1332 ntBASIC13.51□□□□□ -0.25
Vcam1P29533 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Vcam1P29533 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.51□□□□□ -0.25
Vcam1P29533 Gm22442-201ENSMUST00000157256 144 ntBASIC13.51□□□□□ -0.25
Vcam1P29533 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC13.51□□□□□ -0.25
Vcam1P29533 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13.51□□□□□ -0.25
Vcam1P29533 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vcam1P29533 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC13.51□□□□□ -0.25
Vcam1P29533 Gm18065-201ENSMUST00000221395 526 ntBASIC13.51□□□□□ -0.25
Vcam1P29533 AC122346.3-201ENSMUST00000223983 306 ntBASIC13.51□□□□□ -0.25
Vcam1P29533 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.51□□□□□ -0.25
Vcam1P29533 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcam1P29533 Gm10263-201ENSMUST00000085163 300 ntBASIC13.51□□□□□ -0.25
Vcam1P29533 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC13.51□□□□□ -0.25
Vcam1P29533 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vcam1P29533 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Vcam1P29533 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcam1P29533 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vcam1P29533 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcam1P29533 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vcam1P29533 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcam1P29533 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcam1P29533 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vcam1P29533 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.5□□□□□ -0.25
Vcam1P29533 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcam1P29533 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcam1P29533 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcam1P29533 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcam1P29533 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcam1P29533 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcam1P29533 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Vcam1P29533 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vcam1P29533 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcam1P29533 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcam1P29533 Gm11500-201ENSMUST00000118237 601 ntBASIC13.5□□□□□ -0.25
Vcam1P29533 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC13.5□□□□□ -0.25
Vcam1P29533 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.5□□□□□ -0.25
Vcam1P29533 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC13.5□□□□□ -0.25
Vcam1P29533 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.5□□□□□ -0.25
Vcam1P29533 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC13.5□□□□□ -0.25
Vcam1P29533 Gm26134-201ENSMUST00000178484 110 ntBASIC13.5□□□□□ -0.25
Vcam1P29533 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.5□□□□□ -0.25
Vcam1P29533 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC13.5□□□□□ -0.25
Vcam1P29533 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC13.5□□□□□ -0.25
Vcam1P29533 Gm18561-201ENSMUST00000206027 804 ntBASIC13.5□□□□□ -0.25
Vcam1P29533 CT010506.1-201ENSMUST00000223673 349 ntBASIC13.5□□□□□ -0.25
Vcam1P29533 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcam1P29533 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcam1P29533 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcam1P29533 Gm25517-201ENSMUST00000083865 134 ntBASIC13.5□□□□□ -0.25
Vcam1P29533 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Vcam1P29533 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcam1P29533 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.5□□□□□ -0.25
Vcam1P29533 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcam1P29533 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.5□□□□□ -0.25
Vcam1P29533 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcam1P29533 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcam1P29533 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vcam1P29533 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Vcam1P29533 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vcam1P29533 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcam1P29533 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.49□□□□□ -0.25
Vcam1P29533 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.49□□□□□ -0.25
Vcam1P29533 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcam1P29533 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcam1P29533 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Vcam1P29533 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.49□□□□□ -0.25
Vcam1P29533 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcam1P29533 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcam1P29533 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcam1P29533 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vcam1P29533 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcam1P29533 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcam1P29533 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Vcam1P29533 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Vcam1P29533 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcam1P29533 Selenot-ps-201ENSMUST00000119098 593 ntBASIC13.49□□□□□ -0.25
Vcam1P29533 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vcam1P29533 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC13.49□□□□□ -0.25
Vcam1P29533 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC13.49□□□□□ -0.25
Vcam1P29533 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vcam1P29533 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC13.49□□□□□ -0.25
Vcam1P29533 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC13.49□□□□□ -0.25
Vcam1P29533 Gm3017-201ENSMUST00000203603 1126 ntBASIC13.49□□□□□ -0.25
Vcam1P29533 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vcam1P29533 Gm19091-201ENSMUST00000208120 978 ntBASIC13.49□□□□□ -0.25
Vcam1P29533 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Vcam1P29533 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC13.49□□□□□ -0.25
Vcam1P29533 Gm30671-201ENSMUST00000214898 318 ntBASIC13.49□□□□□ -0.25
Vcam1P29533 Gm9139-201ENSMUST00000218817 700 ntBASIC13.49□□□□□ -0.25
Vcam1P29533 AC165154.1-201ENSMUST00000226661 340 ntBASIC13.49□□□□□ -0.25
Vcam1P29533 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Vcam1P29533 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcam1P29533 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Vcam1P29533 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcam1P29533 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Vcam1P29533 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Vcam1P29533 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms