Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cd40lgP27548 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cd40lgP27548 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.96□□□□□ -0.66
Cd40lgP27548 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cd40lgP27548 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cd40lgP27548 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Cd40lgP27548 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cd40lgP27548 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.96□□□□□ -0.66
Cd40lgP27548 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.96□□□□□ -0.66
Cd40lgP27548 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd40lgP27548 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.95□□□□□ -0.66
Cd40lgP27548 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd40lgP27548 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd40lgP27548 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.95□□□□□ -0.66
Cd40lgP27548 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd40lgP27548 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC10.95□□□□□ -0.66
Cd40lgP27548 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd40lgP27548 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cd40lgP27548 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cd40lgP27548 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Cd40lgP27548 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cd40lgP27548 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.95□□□□□ -0.66
Cd40lgP27548 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd40lgP27548 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd40lgP27548 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cd40lgP27548 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cd40lgP27548 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cd40lgP27548 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cd40lgP27548 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cd40lgP27548 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Cd40lgP27548 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cd40lgP27548 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Cd40lgP27548 Gm19208-201ENSMUST00000213861 912 ntBASIC10.95□□□□□ -0.66
Cd40lgP27548 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.95□□□□□ -0.66
Cd40lgP27548 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.95□□□□□ -0.66
Cd40lgP27548 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd40lgP27548 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.95□□□□□ -0.66
Cd40lgP27548 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd40lgP27548 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.95□□□□□ -0.66
Cd40lgP27548 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.95□□□□□ -0.66
Cd40lgP27548 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.95□□□□□ -0.66
Cd40lgP27548 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd40lgP27548 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd40lgP27548 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.95□□□□□ -0.66
Cd40lgP27548 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cd40lgP27548 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd40lgP27548 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Cd40lgP27548 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd40lgP27548 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cd40lgP27548 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cd40lgP27548 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cd40lgP27548 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Cd40lgP27548 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cd40lgP27548 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cd40lgP27548 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cd40lgP27548 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cd40lgP27548 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.94□□□□□ -0.66
Cd40lgP27548 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.94□□□□□ -0.66
Cd40lgP27548 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.94□□□□□ -0.66
Cd40lgP27548 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cd40lgP27548 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.94□□□□□ -0.66
Cd40lgP27548 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cd40lgP27548 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cd40lgP27548 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cd40lgP27548 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cd40lgP27548 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cd40lgP27548 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cd40lgP27548 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cd40lgP27548 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.94□□□□□ -0.66
Cd40lgP27548 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cd40lgP27548 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cd40lgP27548 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.94□□□□□ -0.66
Cd40lgP27548 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.94□□□□□ -0.66
Cd40lgP27548 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cd40lgP27548 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.94□□□□□ -0.66
Cd40lgP27548 Gm16570-201ENSMUST00000161951 436 ntBASIC10.94□□□□□ -0.66
Cd40lgP27548 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cd40lgP27548 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.94□□□□□ -0.66
Cd40lgP27548 Gm2260-201ENSMUST00000184965 657 ntBASIC10.94□□□□□ -0.66
Cd40lgP27548 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.94□□□□□ -0.66
Cd40lgP27548 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.94□□□□□ -0.66
Cd40lgP27548 Gm18730-201ENSMUST00000218038 343 ntBASIC10.94□□□□□ -0.66
Cd40lgP27548 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.94□□□□□ -0.66
Cd40lgP27548 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.94□□□□□ -0.66
Cd40lgP27548 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.94□□□□□ -0.66
Cd40lgP27548 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cd40lgP27548 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Cd40lgP27548 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Cd40lgP27548 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cd40lgP27548 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cd40lgP27548 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cd40lgP27548 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cd40lgP27548 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cd40lgP27548 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cd40lgP27548 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cd40lgP27548 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cd40lgP27548 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cd40lgP27548 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cd40lgP27548 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cd40lgP27548 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms