Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
BdnfP21237 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
BdnfP21237 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
BdnfP21237 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.36□□□□□ -0.59
BdnfP21237 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
BdnfP21237 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
BdnfP21237 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.35□□□□□ -0.59
BdnfP21237 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.35□□□□□ -0.59
BdnfP21237 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
BdnfP21237 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
BdnfP21237 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
BdnfP21237 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Gm14247-201ENSMUST00000120950 237 ntBASIC11.35□□□□□ -0.59
BdnfP21237 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.35□□□□□ -0.59
BdnfP21237 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
BdnfP21237 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.35□□□□□ -0.59
BdnfP21237 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.35□□□□□ -0.59
BdnfP21237 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
BdnfP21237 Gm10608-202ENSMUST00000213924 676 ntBASIC11.35□□□□□ -0.59
BdnfP21237 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.35□□□□□ -0.59
BdnfP21237 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Gm25857-201ENSMUST00000082788 129 ntBASIC11.35□□□□□ -0.59
BdnfP21237 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC11.35□□□□□ -0.59
BdnfP21237 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.35□□□□□ -0.59
BdnfP21237 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.35□□□□□ -0.59
BdnfP21237 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
BdnfP21237 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
BdnfP21237 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.34□□□□□ -0.59
BdnfP21237 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
BdnfP21237 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
BdnfP21237 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
BdnfP21237 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
BdnfP21237 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.34□□□□□ -0.59
BdnfP21237 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
BdnfP21237 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.34□□□□□ -0.59
BdnfP21237 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
BdnfP21237 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
BdnfP21237 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
BdnfP21237 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
BdnfP21237 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
BdnfP21237 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
BdnfP21237 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
BdnfP21237 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
BdnfP21237 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
BdnfP21237 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
BdnfP21237 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
BdnfP21237 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
BdnfP21237 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
BdnfP21237 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
BdnfP21237 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
BdnfP21237 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.34□□□□□ -0.59
BdnfP21237 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.34□□□□□ -0.59
BdnfP21237 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
BdnfP21237 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.34□□□□□ -0.59
BdnfP21237 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
BdnfP21237 Gm24845-201ENSMUST00000158034 109 ntBASIC11.34□□□□□ -0.59
BdnfP21237 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
BdnfP21237 Gm5706-201ENSMUST00000181525 993 ntBASIC11.34□□□□□ -0.59
BdnfP21237 Gm17931-201ENSMUST00000208132 634 ntBASIC11.34□□□□□ -0.59
BdnfP21237 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
BdnfP21237 Gm5950-201ENSMUST00000213337 772 ntBASIC11.34□□□□□ -0.59
BdnfP21237 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
BdnfP21237 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
BdnfP21237 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
BdnfP21237 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
BdnfP21237 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
BdnfP21237 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
BdnfP21237 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
BdnfP21237 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms