Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.87□□□□□ -0.35
Chmp6P0C0A3 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Gm5455-201ENSMUST00000058710 715 ntBASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.87□□□□□ -0.35
Chmp6P0C0A3 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chmp6P0C0A3 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Gm22133-201ENSMUST00000102082 109 ntBASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Gm12164-201ENSMUST00000121695 551 ntBASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Gm5363-201ENSMUST00000211927 938 ntBASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chmp6P0C0A3 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Gm11439-201ENSMUST00000118598 409 ntBASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Gm14247-201ENSMUST00000120950 237 ntBASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Gm28071-201ENSMUST00000190355 478 ntBASIC12.85□□□□□ -0.35
Chmp6P0C0A3 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 AY036118-201ENSMUST00000200021 923 ntBASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Gm4607-201ENSMUST00000206649 577 ntBASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Gm17827-201ENSMUST00000211825 742 ntBASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp6P0C0A3 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms