Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.93□□□□□ -0.18
Col3a1P08121 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col3a1P08121 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col3a1P08121 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col3a1P08121 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col3a1P08121 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col3a1P08121 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col3a1P08121 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.93□□□□□ -0.18
Col3a1P08121 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col3a1P08121 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col3a1P08121 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col3a1P08121 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Col3a1P08121 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col3a1P08121 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col3a1P08121 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col3a1P08121 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Col3a1P08121 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC13.93□□□□□ -0.18
Col3a1P08121 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.93□□□□□ -0.18
Col3a1P08121 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC13.93□□□□□ -0.18
Col3a1P08121 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC13.93□□□□□ -0.18
Col3a1P08121 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col3a1P08121 Gm24992-201ENSMUST00000157412 130 ntBASIC13.93□□□□□ -0.18
Col3a1P08121 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col3a1P08121 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC13.93□□□□□ -0.18
Col3a1P08121 Mir7051-201ENSMUST00000184167 73 ntBASIC13.93□□□□□ -0.18
Col3a1P08121 Gm29164-201ENSMUST00000185454 1024 ntBASIC13.93□□□□□ -0.18
Col3a1P08121 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Col3a1P08121 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col3a1P08121 Gm44008-201ENSMUST00000204345 412 ntBASIC13.93□□□□□ -0.18
Col3a1P08121 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.93□□□□□ -0.18
Col3a1P08121 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.93□□□□□ -0.18
Col3a1P08121 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col3a1P08121 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col3a1P08121 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Col3a1P08121 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col3a1P08121 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.92□□□□□ -0.18
Col3a1P08121 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col3a1P08121 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col3a1P08121 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Col3a1P08121 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col3a1P08121 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col3a1P08121 Gm21759-201ENSMUST00000178345 1828 ntBASIC13.92□□□□□ -0.18
Col3a1P08121 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col3a1P08121 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col3a1P08121 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col3a1P08121 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.92□□□□□ -0.18
Col3a1P08121 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col3a1P08121 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col3a1P08121 Gm12274-201ENSMUST00000120062 385 ntBASIC13.92□□□□□ -0.18
Col3a1P08121 Gm13117-201ENSMUST00000120894 691 ntBASIC13.92□□□□□ -0.18
Col3a1P08121 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC13.92□□□□□ -0.18
Col3a1P08121 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Col3a1P08121 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col3a1P08121 Gm30946-201ENSMUST00000198288 724 ntBASIC13.92□□□□□ -0.18
Col3a1P08121 Gm43380-201ENSMUST00000200421 220 ntBASIC13.92□□□□□ -0.18
Col3a1P08121 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC13.92□□□□□ -0.18
Col3a1P08121 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC13.92□□□□□ -0.18
Col3a1P08121 CT030170.2-201ENSMUST00000223267 126 ntBASIC13.92□□□□□ -0.18
Col3a1P08121 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.92□□□□□ -0.18
Col3a1P08121 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col3a1P08121 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col3a1P08121 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Col3a1P08121 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col3a1P08121 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Col3a1P08121 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col3a1P08121 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col3a1P08121 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Col3a1P08121 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col3a1P08121 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col3a1P08121 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col3a1P08121 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col3a1P08121 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col3a1P08121 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Col3a1P08121 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col3a1P08121 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC13.91□□□□□ -0.18
Col3a1P08121 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col3a1P08121 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col3a1P08121 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col3a1P08121 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Col3a1P08121 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Col3a1P08121 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col3a1P08121 Gm11801-201ENSMUST00000117807 746 ntBASIC13.91□□□□□ -0.18
Col3a1P08121 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col3a1P08121 Gm22877-201ENSMUST00000175451 105 ntBASIC13.91□□□□□ -0.18
Col3a1P08121 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC13.91□□□□□ -0.18
Col3a1P08121 Gm9111-201ENSMUST00000219394 709 ntBASIC13.91□□□□□ -0.18
Col3a1P08121 AC164618.2-201ENSMUST00000224770 573 ntBASIC13.91□□□□□ -0.18
Col3a1P08121 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col3a1P08121 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col3a1P08121 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col3a1P08121 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col3a1P08121 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col3a1P08121 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col3a1P08121 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col3a1P08121 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col3a1P08121 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.91□□□□□ -0.18
Col3a1P08121 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col3a1P08121 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col3a1P08121 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Col3a1P08121 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms