Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TnfP06804 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TnfP06804 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TnfP06804 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.51□□□□□ -0.41
TnfP06804 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TnfP06804 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
TnfP06804 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TnfP06804 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TnfP06804 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
TnfP06804 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TnfP06804 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.5□□□□□ -0.41
TnfP06804 Gm11246-201ENSMUST00000120880 345 ntBASIC12.5□□□□□ -0.41
TnfP06804 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.5□□□□□ -0.41
TnfP06804 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TnfP06804 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TnfP06804 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TnfP06804 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.5□□□□□ -0.41
TnfP06804 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.5□□□□□ -0.41
TnfP06804 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.5□□□□□ -0.41
TnfP06804 Gm10807-201ENSMUST00000177134 795 ntBASIC12.5□□□□□ -0.41
TnfP06804 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.5□□□□□ -0.41
TnfP06804 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.5□□□□□ -0.41
TnfP06804 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.5□□□□□ -0.41
TnfP06804 Gm43852-201ENSMUST00000202098 917 ntBASIC12.5□□□□□ -0.41
TnfP06804 Gm9463-201ENSMUST00000206707 601 ntBASIC12.5□□□□□ -0.41
TnfP06804 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TnfP06804 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.5□□□□□ -0.41
TnfP06804 Gm45550-201ENSMUST00000209380 946 ntBASIC12.5□□□□□ -0.41
TnfP06804 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.5□□□□□ -0.41
TnfP06804 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.5□□□□□ -0.41
TnfP06804 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TnfP06804 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.5□□□□□ -0.41
TnfP06804 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TnfP06804 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TnfP06804 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.5□□□□□ -0.41
TnfP06804 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.5□□□□□ -0.41
TnfP06804 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TnfP06804 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.5□□□□□ -0.41
TnfP06804 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TnfP06804 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TnfP06804 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TnfP06804 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TnfP06804 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TnfP06804 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TnfP06804 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TnfP06804 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TnfP06804 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TnfP06804 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TnfP06804 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TnfP06804 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.5□□□□□ -0.41
TnfP06804 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TnfP06804 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TnfP06804 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
TnfP06804 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TnfP06804 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TnfP06804 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.49□□□□□ -0.41
TnfP06804 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TnfP06804 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.49□□□□□ -0.41
TnfP06804 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TnfP06804 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.49□□□□□ -0.41
TnfP06804 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.49□□□□□ -0.41
TnfP06804 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.49□□□□□ -0.41
TnfP06804 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TnfP06804 Gm27910-201ENSMUST00000185004 107 ntBASIC12.49□□□□□ -0.41
TnfP06804 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.49□□□□□ -0.41
TnfP06804 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.49□□□□□ -0.41
TnfP06804 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.49□□□□□ -0.41
TnfP06804 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 Snora73b-201ENSMUST00000083419 205 ntBASIC12.49□□□□□ -0.41
TnfP06804 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TnfP06804 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.49□□□□□ -0.41
TnfP06804 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.49□□□□□ -0.41
TnfP06804 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms