Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
P06344 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
P06344 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P06344 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P06344 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P06344 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P06344 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.53□□□□□ -0.72
P06344 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P06344 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P06344 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P06344 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P06344 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P06344 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P06344 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.53□□□□□ -0.72
P06344 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
P06344 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P06344 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P06344 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P06344 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P06344 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P06344 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P06344 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.53□□□□□ -0.72
P06344 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
P06344 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.53□□□□□ -0.72
P06344 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P06344 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
P06344 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
P06344 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
P06344 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
P06344 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06344 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06344 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
P06344 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
P06344 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06344 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06344 Gm11663-201ENSMUST00000117888 290 ntBASIC10.52□□□□□ -0.73
P06344 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.52□□□□□ -0.73
P06344 Gm8199-201ENSMUST00000121323 823 ntBASIC10.52□□□□□ -0.73
P06344 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06344 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
P06344 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.52□□□□□ -0.73
P06344 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P06344 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06344 Gm23699-201ENSMUST00000158835 135 ntBASIC10.52□□□□□ -0.73
P06344 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
P06344 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P06344 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.52□□□□□ -0.73
P06344 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC10.52□□□□□ -0.73
P06344 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC10.52□□□□□ -0.73
P06344 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.52□□□□□ -0.73
P06344 Gm1821-202ENSMUST00000227415 750 ntBASIC10.52□□□□□ -0.73
P06344 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
P06344 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06344 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06344 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06344 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.52□□□□□ -0.73
P06344 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
P06344 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06344 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06344 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P06344 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.52□□□□□ -0.73
P06344 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06344 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.52□□□□□ -0.73
P06344 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06344 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06344 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06344 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06344 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
P06344 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P06344 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.52□□□□□ -0.73
P06344 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P06344 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P06344 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
P06344 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
P06344 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
P06344 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.51□□□□□ -0.73
P06344 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.51□□□□□ -0.73
P06344 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.51□□□□□ -0.73
P06344 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
P06344 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.51□□□□□ -0.73
P06344 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
P06344 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
P06344 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms