Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
P04940 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
P04940 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
P04940 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
P04940 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
P04940 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC9.55□□□□□ -0.88
P04940 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
P04940 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
P04940 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
P04940 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
P04940 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
P04940 Gm13812-201ENSMUST00000118061 1347 ntBASIC9.55□□□□□ -0.88
P04940 Gm13810-201ENSMUST00000118584 1347 ntBASIC9.55□□□□□ -0.88
P04940 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.55□□□□□ -0.88
P04940 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
P04940 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
P04940 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
P04940 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC9.54□□□□□ -0.88
P04940 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Gm43984-201ENSMUST00000204572 2864 ntBASIC9.54□□□□□ -0.88
P04940 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.54□□□□□ -0.88
P04940 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
P04940 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC9.54□□□□□ -0.88
P04940 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC9.54□□□□□ -0.88
P04940 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9.54□□□□□ -0.88
P04940 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Gm11663-201ENSMUST00000117888 290 ntBASIC9.54□□□□□ -0.88
P04940 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC9.54□□□□□ -0.88
P04940 Gm26047-201ENSMUST00000157308 113 ntBASIC9.54□□□□□ -0.88
P04940 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC9.54□□□□□ -0.88
P04940 Gm6548-201ENSMUST00000167498 1165 ntBASIC9.54□□□□□ -0.88
P04940 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.54□□□□□ -0.88
P04940 Gm8815-201ENSMUST00000173809 620 ntBASIC9.54□□□□□ -0.88
P04940 Gm28686-201ENSMUST00000187404 609 ntBASIC9.54□□□□□ -0.88
P04940 Gm5714-201ENSMUST00000197343 566 ntBASIC9.54□□□□□ -0.88
P04940 Gm26047-202ENSMUST00000198840 115 ntBASIC9.54□□□□□ -0.88
P04940 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC9.54□□□□□ -0.88
P04940 Gm45186-201ENSMUST00000206874 478 ntBASIC9.54□□□□□ -0.88
P04940 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC9.54□□□□□ -0.88
P04940 Gm8385-201ENSMUST00000058999 643 ntBASIC9.54□□□□□ -0.88
P04940 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC9.54□□□□□ -0.88
P04940 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
P04940 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
P04940 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
P04940 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
P04940 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
P04940 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04940 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04940 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
P04940 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
P04940 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04940 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
P04940 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04940 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
P04940 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04940 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
P04940 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
P04940 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
P04940 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.53□□□□□ -0.88
P04940 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04940 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
P04940 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
P04940 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04940 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04940 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04940 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04940 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
P04940 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC9.53□□□□□ -0.88
P04940 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
P04940 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
P04940 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
P04940 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC9.53□□□□□ -0.88
P04940 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms