Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.77□□□□□ -0.37
Vti1aO89116 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.77□□□□□ -0.37
Vti1aO89116 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.77□□□□□ -0.37
Vti1aO89116 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1aO89116 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1aO89116 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Vti1aO89116 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1aO89116 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.77□□□□□ -0.37
Vti1aO89116 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1aO89116 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Vti1aO89116 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.77□□□□□ -0.37
Vti1aO89116 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1aO89116 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1aO89116 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1aO89116 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1aO89116 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Vti1aO89116 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1aO89116 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1aO89116 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1aO89116 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Vti1aO89116 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1aO89116 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1aO89116 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1aO89116 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Vti1aO89116 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Vti1aO89116 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1aO89116 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1aO89116 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1aO89116 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Vti1aO89116 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1aO89116 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1aO89116 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Vti1aO89116 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vti1aO89116 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.77□□□□□ -0.37
Vti1aO89116 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.76□□□□□ -0.37
Vti1aO89116 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vti1aO89116 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Vti1aO89116 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1aO89116 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1aO89116 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1aO89116 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.76□□□□□ -0.37
Vti1aO89116 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1aO89116 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1aO89116 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Vti1aO89116 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1aO89116 Gm26286-201ENSMUST00000104166 134 ntBASIC12.76□□□□□ -0.37
Vti1aO89116 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.76□□□□□ -0.37
Vti1aO89116 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Vti1aO89116 Gm8566-201ENSMUST00000120174 465 ntBASIC12.76□□□□□ -0.37
Vti1aO89116 Gm8199-201ENSMUST00000121323 823 ntBASIC12.76□□□□□ -0.37
Vti1aO89116 Gm15881-201ENSMUST00000148792 942 ntBASIC12.76□□□□□ -0.37
Vti1aO89116 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.76□□□□□ -0.37
Vti1aO89116 Gm20614-201ENSMUST00000177106 632 ntBASIC12.76□□□□□ -0.37
Vti1aO89116 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1aO89116 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1aO89116 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1aO89116 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1aO89116 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1aO89116 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.76□□□□□ -0.37
Vti1aO89116 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.76□□□□□ -0.37
Vti1aO89116 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.76□□□□□ -0.37
Vti1aO89116 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vti1aO89116 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1aO89116 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.76□□□□□ -0.37
Vti1aO89116 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.76□□□□□ -0.37
Vti1aO89116 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1aO89116 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vti1aO89116 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.76□□□□□ -0.37
Vti1aO89116 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1aO89116 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1aO89116 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Vti1aO89116 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1aO89116 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1aO89116 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Vti1aO89116 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1aO89116 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1aO89116 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1aO89116 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vti1aO89116 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Vti1aO89116 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.75□□□□□ -0.37
Vti1aO89116 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.75□□□□□ -0.37
Vti1aO89116 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1aO89116 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1aO89116 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1aO89116 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1aO89116 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Vti1aO89116 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1aO89116 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1aO89116 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1aO89116 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.75□□□□□ -0.37
Vti1aO89116 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1aO89116 Gm4726-201ENSMUST00000135604 736 ntBASIC12.75□□□□□ -0.37
Vti1aO89116 Gm6019-201ENSMUST00000148369 736 ntBASIC12.75□□□□□ -0.37
Vti1aO89116 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.75□□□□□ -0.37
Vti1aO89116 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Vti1aO89116 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.75□□□□□ -0.37
Vti1aO89116 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1aO89116 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vti1aO89116 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.75□□□□□ -0.37
Vti1aO89116 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms