Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClppO88696 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ClppO88696 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClppO88696 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClppO88696 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
ClppO88696 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClppO88696 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
ClppO88696 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.62□□□□□ -0.55
ClppO88696 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
ClppO88696 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
ClppO88696 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.62□□□□□ -0.55
ClppO88696 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.62□□□□□ -0.55
ClppO88696 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.62□□□□□ -0.55
ClppO88696 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
ClppO88696 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
ClppO88696 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
ClppO88696 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
ClppO88696 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
ClppO88696 Gm9062-201ENSMUST00000117712 727 ntBASIC11.62□□□□□ -0.55
ClppO88696 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.62□□□□□ -0.55
ClppO88696 Gm12380-201ENSMUST00000119012 544 ntBASIC11.62□□□□□ -0.55
ClppO88696 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.62□□□□□ -0.55
ClppO88696 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.62□□□□□ -0.55
ClppO88696 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.62□□□□□ -0.55
ClppO88696 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.62□□□□□ -0.55
ClppO88696 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.62□□□□□ -0.55
ClppO88696 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.62□□□□□ -0.55
ClppO88696 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.62□□□□□ -0.55
ClppO88696 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.62□□□□□ -0.55
ClppO88696 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.62□□□□□ -0.55
ClppO88696 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
ClppO88696 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ClppO88696 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
ClppO88696 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClppO88696 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.61□□□□□ -0.55
ClppO88696 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ClppO88696 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClppO88696 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClppO88696 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClppO88696 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClppO88696 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
ClppO88696 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
ClppO88696 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClppO88696 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClppO88696 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClppO88696 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.61□□□□□ -0.55
ClppO88696 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.61□□□□□ -0.55
ClppO88696 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.61□□□□□ -0.55
ClppO88696 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.61□□□□□ -0.55
ClppO88696 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ClppO88696 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.61□□□□□ -0.55
ClppO88696 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.61□□□□□ -0.55
ClppO88696 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.61□□□□□ -0.55
ClppO88696 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.61□□□□□ -0.55
ClppO88696 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.61□□□□□ -0.55
ClppO88696 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClppO88696 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.61□□□□□ -0.55
ClppO88696 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClppO88696 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClppO88696 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClppO88696 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClppO88696 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC11.61□□□□□ -0.55
ClppO88696 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClppO88696 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClppO88696 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClppO88696 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClppO88696 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClppO88696 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClppO88696 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClppO88696 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClppO88696 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClppO88696 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms