Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops6O88545 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops6O88545 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cops6O88545 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Cops6O88545 Gm12247-201ENSMUST00000117585 670 ntBASIC14.36□□□□□ -0.11
Cops6O88545 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC14.36□□□□□ -0.11
Cops6O88545 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Cops6O88545 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC14.36□□□□□ -0.11
Cops6O88545 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Cops6O88545 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cops6O88545 Gm17825-201ENSMUST00000206836 794 ntBASIC14.36□□□□□ -0.11
Cops6O88545 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops6O88545 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC14.36□□□□□ -0.11
Cops6O88545 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC14.36□□□□□ -0.11
Cops6O88545 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops6O88545 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops6O88545 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops6O88545 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cops6O88545 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cops6O88545 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cops6O88545 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cops6O88545 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops6O88545 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cops6O88545 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops6O88545 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.36□□□□□ -0.11
Cops6O88545 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops6O88545 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cops6O88545 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cops6O88545 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Cops6O88545 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Cops6O88545 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 Gm4900-201ENSMUST00000222046 1628 ntBASIC14.35□□□□□ -0.11
Cops6O88545 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 Gm25766-201ENSMUST00000104101 131 ntBASIC14.35□□□□□ -0.11
Cops6O88545 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC14.35□□□□□ -0.11
Cops6O88545 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC14.35□□□□□ -0.11
Cops6O88545 Gm15744-201ENSMUST00000161734 213 ntBASIC14.35□□□□□ -0.11
Cops6O88545 Gm6548-201ENSMUST00000167498 1165 ntBASIC14.35□□□□□ -0.11
Cops6O88545 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 Gm5100-201ENSMUST00000195631 589 ntBASIC14.35□□□□□ -0.11
Cops6O88545 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC14.35□□□□□ -0.11
Cops6O88545 AC136376.2-201ENSMUST00000228819 490 ntBASIC14.35□□□□□ -0.11
Cops6O88545 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cops6O88545 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC14.35□□□□□ -0.11
Cops6O88545 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cops6O88545 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cops6O88545 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cops6O88545 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC14.35□□□□□ -0.11
Cops6O88545 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.35□□□□□ -0.11
Cops6O88545 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cops6O88545 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cops6O88545 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cops6O88545 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops6O88545 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cops6O88545 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops6O88545 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops6O88545 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cops6O88545 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops6O88545 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops6O88545 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.34□□□□□ -0.11
Cops6O88545 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cops6O88545 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops6O88545 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops6O88545 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC14.34□□□□□ -0.11
Cops6O88545 Gm13668-201ENSMUST00000119237 1001 ntBASIC14.34□□□□□ -0.11
Cops6O88545 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC14.34□□□□□ -0.11
Cops6O88545 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops6O88545 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops6O88545 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops6O88545 Gm38314-201ENSMUST00000195709 625 ntBASIC14.34□□□□□ -0.11
Cops6O88545 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC14.34□□□□□ -0.11
Cops6O88545 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cops6O88545 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC14.34□□□□□ -0.11
Cops6O88545 AC099645.1-201ENSMUST00000226476 1105 ntBASIC14.34□□□□□ -0.11
Cops6O88545 n-R5s211-201ENSMUST00000093689 119 ntBASIC14.34□□□□□ -0.11
Cops6O88545 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cops6O88545 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cops6O88545 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms