Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chrna4O70174 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Chrna4O70174 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chrna4O70174 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chrna4O70174 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chrna4O70174 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chrna4O70174 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chrna4O70174 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.89□□□□□ -0.51
Chrna4O70174 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.89□□□□□ -0.51
Chrna4O70174 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chrna4O70174 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chrna4O70174 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chrna4O70174 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chrna4O70174 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chrna4O70174 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chrna4O70174 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Chrna4O70174 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.88□□□□□ -0.51
Chrna4O70174 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.88□□□□□ -0.51
Chrna4O70174 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chrna4O70174 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Chrna4O70174 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chrna4O70174 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chrna4O70174 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Chrna4O70174 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Chrna4O70174 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chrna4O70174 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chrna4O70174 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chrna4O70174 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chrna4O70174 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Chrna4O70174 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chrna4O70174 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Chrna4O70174 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.88□□□□□ -0.51
Chrna4O70174 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.88□□□□□ -0.51
Chrna4O70174 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.88□□□□□ -0.51
Chrna4O70174 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.88□□□□□ -0.51
Chrna4O70174 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chrna4O70174 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.88□□□□□ -0.51
Chrna4O70174 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chrna4O70174 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chrna4O70174 Gm28937-201ENSMUST00000185413 695 ntBASIC11.88□□□□□ -0.51
Chrna4O70174 Gm29400-201ENSMUST00000187208 695 ntBASIC11.88□□□□□ -0.51
Chrna4O70174 Gm28662-201ENSMUST00000188446 695 ntBASIC11.88□□□□□ -0.51
Chrna4O70174 Gm28251-201ENSMUST00000188835 695 ntBASIC11.88□□□□□ -0.51
Chrna4O70174 Gm37318-201ENSMUST00000194325 695 ntBASIC11.88□□□□□ -0.51
Chrna4O70174 Gm38017-201ENSMUST00000194768 695 ntBASIC11.88□□□□□ -0.51
Chrna4O70174 Gm37287-201ENSMUST00000195449 695 ntBASIC11.88□□□□□ -0.51
Chrna4O70174 Gm37793-201ENSMUST00000195548 695 ntBASIC11.88□□□□□ -0.51
Chrna4O70174 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chrna4O70174 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Chrna4O70174 Gm2553-201ENSMUST00000215986 605 ntBASIC11.88□□□□□ -0.51
Chrna4O70174 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.88□□□□□ -0.51
Chrna4O70174 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Chrna4O70174 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chrna4O70174 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chrna4O70174 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chrna4O70174 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chrna4O70174 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chrna4O70174 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Chrna4O70174 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chrna4O70174 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Chrna4O70174 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Chrna4O70174 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.88□□□□□ -0.51
Chrna4O70174 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Chrna4O70174 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Chrna4O70174 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chrna4O70174 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Chrna4O70174 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chrna4O70174 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chrna4O70174 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chrna4O70174 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Chrna4O70174 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chrna4O70174 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chrna4O70174 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chrna4O70174 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Chrna4O70174 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Chrna4O70174 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.87□□□□□ -0.51
Chrna4O70174 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Chrna4O70174 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.87□□□□□ -0.51
Chrna4O70174 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.87□□□□□ -0.51
Chrna4O70174 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.87□□□□□ -0.51
Chrna4O70174 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.87□□□□□ -0.51
Chrna4O70174 Gm6450-201ENSMUST00000200896 574 ntBASIC11.87□□□□□ -0.51
Chrna4O70174 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.87□□□□□ -0.51
Chrna4O70174 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.87□□□□□ -0.51
Chrna4O70174 Gm18212-201ENSMUST00000211678 889 ntBASIC11.87□□□□□ -0.51
Chrna4O70174 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chrna4O70174 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chrna4O70174 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Chrna4O70174 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Chrna4O70174 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Chrna4O70174 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chrna4O70174 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chrna4O70174 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chrna4O70174 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Chrna4O70174 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chrna4O70174 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chrna4O70174 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chrna4O70174 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chrna4O70174 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chrna4O70174 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms