Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
AlyrefO08583 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
AlyrefO08583 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
AlyrefO08583 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.08□□□□□ -0.48
AlyrefO08583 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.08□□□□□ -0.48
AlyrefO08583 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC12.08□□□□□ -0.48
AlyrefO08583 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.08□□□□□ -0.48
AlyrefO08583 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.08□□□□□ -0.48
AlyrefO08583 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
AlyrefO08583 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.08□□□□□ -0.48
AlyrefO08583 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.08□□□□□ -0.48
AlyrefO08583 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.08□□□□□ -0.48
AlyrefO08583 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.08□□□□□ -0.48
AlyrefO08583 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC12.08□□□□□ -0.48
AlyrefO08583 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.08□□□□□ -0.48
AlyrefO08583 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.08□□□□□ -0.48
AlyrefO08583 AC160962.2-201ENSMUST00000224761 632 ntBASIC12.08□□□□□ -0.48
AlyrefO08583 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
AlyrefO08583 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
AlyrefO08583 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
AlyrefO08583 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
AlyrefO08583 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.08□□□□□ -0.48
AlyrefO08583 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AlyrefO08583 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AlyrefO08583 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
AlyrefO08583 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
AlyrefO08583 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AlyrefO08583 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AlyrefO08583 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AlyrefO08583 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
AlyrefO08583 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
AlyrefO08583 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.07□□□□□ -0.48
AlyrefO08583 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
AlyrefO08583 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AlyrefO08583 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AlyrefO08583 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.07□□□□□ -0.48
AlyrefO08583 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AlyrefO08583 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AlyrefO08583 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AlyrefO08583 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
AlyrefO08583 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
AlyrefO08583 Gm23062-201ENSMUST00000102349 110 ntBASIC12.07□□□□□ -0.48
AlyrefO08583 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AlyrefO08583 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC12.07□□□□□ -0.48
AlyrefO08583 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
AlyrefO08583 Gm15620-201ENSMUST00000122949 270 ntBASIC12.07□□□□□ -0.48
AlyrefO08583 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.07□□□□□ -0.48
AlyrefO08583 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
AlyrefO08583 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AlyrefO08583 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
AlyrefO08583 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.07□□□□□ -0.48
AlyrefO08583 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.07□□□□□ -0.48
AlyrefO08583 Gm23400-201ENSMUST00000174994 102 ntBASIC12.07□□□□□ -0.48
AlyrefO08583 Gm26463-201ENSMUST00000175065 101 ntBASIC12.07□□□□□ -0.48
AlyrefO08583 Gm24332-201ENSMUST00000175102 102 ntBASIC12.07□□□□□ -0.48
AlyrefO08583 Gm25959-201ENSMUST00000175112 102 ntBASIC12.07□□□□□ -0.48
AlyrefO08583 Gm22475-201ENSMUST00000175169 102 ntBASIC12.07□□□□□ -0.48
AlyrefO08583 Gm22903-201ENSMUST00000175193 102 ntBASIC12.07□□□□□ -0.48
AlyrefO08583 Gm25070-201ENSMUST00000175237 102 ntBASIC12.07□□□□□ -0.48
AlyrefO08583 Gm24159-201ENSMUST00000175264 102 ntBASIC12.07□□□□□ -0.48
AlyrefO08583 Gm25299-201ENSMUST00000175283 102 ntBASIC12.07□□□□□ -0.48
AlyrefO08583 Gm23798-201ENSMUST00000175560 102 ntBASIC12.07□□□□□ -0.48
AlyrefO08583 Gm23802-201ENSMUST00000175565 102 ntBASIC12.07□□□□□ -0.48
AlyrefO08583 Gm25708-201ENSMUST00000177687 102 ntBASIC12.07□□□□□ -0.48
AlyrefO08583 Gm24370-201ENSMUST00000178007 102 ntBASIC12.07□□□□□ -0.48
AlyrefO08583 Gm23049-201ENSMUST00000178068 102 ntBASIC12.07□□□□□ -0.48
AlyrefO08583 Gm28019-201ENSMUST00000178138 101 ntBASIC12.07□□□□□ -0.48
AlyrefO08583 Gm25571-201ENSMUST00000178322 102 ntBASIC12.07□□□□□ -0.48
AlyrefO08583 Gm25355-201ENSMUST00000178456 101 ntBASIC12.07□□□□□ -0.48
AlyrefO08583 Gm26134-201ENSMUST00000178484 110 ntBASIC12.07□□□□□ -0.48
AlyrefO08583 Gm24975-201ENSMUST00000178492 101 ntBASIC12.07□□□□□ -0.48
AlyrefO08583 Gm23189-201ENSMUST00000178954 102 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms